Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:71171052-71563836

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26561 17 70878078 to 71393284 515206 + lincRNA gene predicted gene, 26561
1600022D10Rik 17 71144538 to 71181987 37449 + lincRNA gene RIKEN cDNA 1600022D10 gene
Tssr145733 17 71179181 to 71179194 13 + TSS region transcription start site region 145733
Tssr145734 17 71182589 to 71182596 7 + TSS region transcription start site region 145734
Cpgi9471 17 71182924 to 71184595 1671 CpG island CpG island 9471
Lpin2 17 71183527 to 71249818 66291 + protein coding gene lipin 2
Tssr145735 17 71183545 to 71183570 25 + TSS region transcription start site region 145735
Tssr145736 17 71183576 to 71183598 22 + TSS region transcription start site region 145736
Tssr145737 17 71183601 to 71183610 9 + TSS region transcription start site region 145737
Tssr145738 17 71183704 to 71183715 11 + TSS region transcription start site region 145738
Tssr145739 17 71198649 to 71198653 4 + TSS region transcription start site region 145739
Tssr145740 17 71204531 to 71204554 23 + TSS region transcription start site region 145740
Tssr145741 17 71204573 to 71204591 18 + TSS region transcription start site region 145741
Tssr145742 17 71204633 to 71204641 8 + TSS region transcription start site region 145742
Tssr145743 17 71204647 to 71204693 46 + TSS region transcription start site region 145743
Tssr145744 17 71204698 to 71204701 3 + TSS region transcription start site region 145744
Tssr145745 17 71214796 to 71214838 42 + TSS region transcription start site region 145745
Tssr145746 17 71220202 to 71220211 9 + TSS region transcription start site region 145746
Tssr145747 17 71238497 to 71238501 4 + TSS region transcription start site region 145747
Emilin2 17 71252172 to 71311633 59461 - protein coding gene elastin microfibril interfacer 2
Tssr149268 17 71256347 to 71256364 17 - TSS region transcription start site region 149268
Tssr149269 17 71256834 to 71256845 11 - TSS region transcription start site region 149269
Tssr149270 17 71256851 to 71256862 11 - TSS region transcription start site region 149270
Tssr149271 17 71256863 to 71256878 15 - TSS region transcription start site region 149271
Tssr149272 17 71256885 to 71256930 45 - TSS region transcription start site region 149272
Tssr149273 17 71257242 to 71257259 17 - TSS region transcription start site region 149273
Tssr145748 17 71259995 to 71260006 11 + TSS region transcription start site region 145748
Tssr149274 17 71263029 to 71263033 4 - TSS region transcription start site region 149274
Tssr149275 17 71268567 to 71268588 21 - TSS region transcription start site region 149275
Tssr149276 17 71268589 to 71268604 15 - TSS region transcription start site region 149276
Tssr149277 17 71268620 to 71268631 11 - TSS region transcription start site region 149277
Tssr149278 17 71270312 to 71270354 42 - TSS region transcription start site region 149278
Cpgi9472 17 71274266 to 71274688 422 CpG island CpG island 9472
Tssr149279 17 71300922 to 71300937 15 - TSS region transcription start site region 149279
Cpgi9473 17 71310093 to 71311359 1266 CpG island CpG island 9473
Tssr149280 17 71310833 to 71310844 11 - TSS region transcription start site region 149280
Tssr149281 17 71310899 to 71310917 18 - TSS region transcription start site region 149281
Tssr149282 17 71310925 to 71310947 22 - TSS region transcription start site region 149282
Tssr149283 17 71310952 to 71310969 17 - TSS region transcription start site region 149283
Tssr149284 17 71310975 to 71310995 20 - TSS region transcription start site region 149284
Tssr145749 17 71311010 to 71311057 47 + TSS region transcription start site region 145749
Tssr145750 17 71315440 to 71315459 19 + TSS region transcription start site region 145750
4930471L23Rik 17 71315456 to 71339746 24290 + lincRNA gene RIKEN cDNA 4930471L23 gene
D17Mit159 17 71317684 to 71317833 149 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 159
Gm4566 17 71333201 to 71341804 8603 - pseudogene predicted gene 4566
Smchd1 17 71344489 to 71475343 130854 - protein coding gene SMC hinge domain containing 1
Gm37639 17 71366052 to 71368836 2784 - unclassified gene predicted gene, 37639
Gm38220 17 71391838 to 71393284 1446 - unclassified gene predicted gene, 38220
Gm49916 17 71421547 to 71421697 150 + pseudogene predicted gene, 49916
Tssr149285 17 71452878 to 71452883 5 - TSS region transcription start site region 149285
Tssr149286 17 71455668 to 71455685 17 - TSS region transcription start site region 149286
D17Wsu164e 17 71458201 to 71458436 235 DNA segment DNA segment, Chr 17, Wayne State University 164, expressed
Gm4707 17 71458327 to 71459918 1591 - pseudogene predicted gene 4707
Cpgi9474 17 71474581 to 71476097 1516 CpG island CpG island 9474
Tssr149287 17 71475285 to 71475340 55 - TSS region transcription start site region 149287
Tssr149288 17 71475348 to 71475359 11 - TSS region transcription start site region 149288
Tssr149289 17 71475360 to 71475371 11 - TSS region transcription start site region 149289
Tssr149290 17 71475477 to 71475505 28 - TSS region transcription start site region 149290
Tssr149291 17 71475515 to 71475526 11 - TSS region transcription start site region 149291
Tssr149292 17 71475891 to 71475903 12 - TSS region transcription start site region 149292
Gm18738 17 71483392 to 71483914 522 + pseudogene predicted gene, 18738
Tssr149293 17 71486336 to 71486361 25 - TSS region transcription start site region 149293
Ndc80 17 71496100 to 71526857 30757 - protein coding gene NDC80 kinetochore complex component
Gm23115 17 71506436 to 71506543 107 - rRNA gene predicted gene, 23115
Cpgi9475 17 71526385 to 71527360 975 CpG island CpG island 9475
Tssr149294 17 71526758 to 71526817 59 - TSS region transcription start site region 149294
Tssr149295 17 71526819 to 71526837 18 - TSS region transcription start site region 149295
Mettl4-ps1 17 71528986 to 71544207 15221 + pseudogene methyltransferase like 4, pseudogene 1
Cpgi9476 17 71551590 to 71552608 1018 CpG island CpG island 9476
Tssr145751 17 71552031 to 71552079 48 + TSS region transcription start site region 145751
Spdya 17 71552061 to 71589533 37472 + protein coding gene speedy/RINGO cell cycle regulator family, member A
Tssr145752 17 71552083 to 71552094 11 + TSS region transcription start site region 145752
Trmt61b 17 71557027 to 71598755 41728 - unclassified non-coding RNA gene tRNA methyltransferase 61B