MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:7090115-7383315

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr142488	17	7138438 to 7138451	13	+	TSS region	transcription start site region 142488
Tssr142489	17	7138463 to 7138483	20	+	TSS region	transcription start site region 142489
Tssr142490	17	7138495 to 7138502	7	+	TSS region	transcription start site region 142490
Cpgi8578	17	7169348 to 7170807	1459		CpG island	CpG island 8578
Tssr146344	17	7169721 to 7169744	23	-	TSS region	transcription start site region 146344
Tssr146345	17	7169817 to 7169828	11	-	TSS region	transcription start site region 146345
Tssr142491	17	7170085 to 7170097	12	+	TSS region	transcription start site region 142491
Tssr142492	17	7170101 to 7170132	31	+	TSS region	transcription start site region 142492
Rps6ka2	17	7170115 to 7303315	133200	+	protein coding gene	ribosomal protein S6 kinase, polypeptide 2
Tssr142493	17	7170137 to 7170163	26	+	TSS region	transcription start site region 142493
D17Jcs90	17	7286943 to 7287138	195		DNA segment	DNA segment, Chr 17, John C. Schimenti 90
Gpr31a	17	7314888 to 7315846	958	-	pseudogene	G protein-coupled receptor 31, D17Leh66a region
Tcp10a	17	7324657 to 7345860	21203	+	protein coding gene	t-complex protein 10a
Tssr142494	17	7324660 to 7324677	17	+	TSS region	transcription start site region 142494
Ttll2	17	7350885 to 7352696	1811	-	protein coding gene	tubulin tyrosine ligase-like family, member 2
Gm49630	17	7352064 to 7371979	19915	-	protein coding gene	predicted gene, 49630
Unc93a2	17	7362815 to 7385464	22649	-	protein coding gene	unc-93 homolog A2
Gm26057	17	7374193 to 7374357	164	-	snRNA gene	predicted gene, 26057