Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:70872863-71172875

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr149239 17 70873421 to 70873438 17 - TSS region transcription start site region 149239
Tssr145701 17 70873507 to 70873554 47 + TSS region transcription start site region 145701
Tssr149240 17 70874809 to 70874822 13 - TSS region transcription start site region 149240
Gm9320 17 70875809 to 70876313 504 + pseudogene predicted gene 9320
Tssr145702 17 70875809 to 70875812 3 + TSS region transcription start site region 145702
Gm26510 17 70876689 to 70925074 48385 - lincRNA gene predicted gene, 26510
Gm26561 17 70878078 to 71393284 515206 + lincRNA gene predicted gene, 26561
Gm49902 17 70891029 to 70892909 1880 - unclassified gene predicted gene, 49902
Tssr149241 17 70892864 to 70892881 17 - TSS region transcription start site region 149241
Tssr145703 17 70900970 to 70900979 9 + TSS region transcription start site region 145703
Tssr145704 17 70900991 to 70901007 16 + TSS region transcription start site region 145704
Tssr145705 17 70901035 to 70901047 12 + TSS region transcription start site region 145705
Tssr149242 17 70919854 to 70919889 35 - TSS region transcription start site region 149242
Tssr149243 17 70919896 to 70919919 23 - TSS region transcription start site region 149243
Tssr149244 17 70920011 to 70920017 6 - TSS region transcription start site region 149244
Tssr149245 17 70921756 to 70921765 9 - TSS region transcription start site region 149245
Tssr149246 17 70924958 to 70925003 45 - TSS region transcription start site region 149246
Gm49904 17 70926202 to 70926532 330 - pseudogene predicted gene, 49904
Tssr145706 17 70929006 to 70929007 1 + TSS region transcription start site region 145706
Gm16519 17 70929058 to 70929546 488 + pseudogene predicted gene, 16519
Gm46595 17 70944702 to 70970639 25937 - lncRNA gene predicted gene, 46595
Gm49905 17 70957124 to 70957920 796 + pseudogene predicted gene, 49905
Tssr145707 17 70963659 to 70963667 8 + TSS region transcription start site region 145707
Tssr145708 17 70963701 to 70963738 37 + TSS region transcription start site region 145708
Tssr145709 17 70963773 to 70963803 30 + TSS region transcription start site region 145709
Tssr145710 17 70963805 to 70963818 13 + TSS region transcription start site region 145710
Tssr145711 17 70963823 to 70963837 14 + TSS region transcription start site region 145711
Tssr145712 17 70967872 to 70967894 22 + TSS region transcription start site region 145712
Gm41611 17 70967886 to 70971805 3919 + lincRNA gene predicted gene, 41611
Myl12b 17 70973963 to 70990516 16553 - protein coding gene myosin, light chain 12B, regulatory
Gm49909 17 70974119 to 71002208 28089 - protein coding gene predicted gene, 49909
Tssr145713 17 70974184 to 70974197 13 + TSS region transcription start site region 145713
Tssr149247 17 70974194 to 70974227 33 - TSS region transcription start site region 149247
Tssr145714 17 70974232 to 70974261 29 + TSS region transcription start site region 145714
Tssr149248 17 70978508 to 70978557 49 - TSS region transcription start site region 149248
Tssr145715 17 70986308 to 70986317 9 + TSS region transcription start site region 145715
Tssr149249 17 70987067 to 70987072 5 - TSS region transcription start site region 149249
Tssr145716 17 70988481 to 70988487 6 + TSS region transcription start site region 145716
Cpgi9469 17 70990052 to 70991112 1060 CpG island CpG island 9469
Tssr149250 17 70990507 to 70990548 41 - TSS region transcription start site region 149250
Tssr149251 17 70990549 to 70990562 13 - TSS region transcription start site region 149251
Tssr149252 17 70990691 to 70990704 13 - TSS region transcription start site region 149252
Tssr149253 17 70990717 to 70990727 10 - TSS region transcription start site region 149253
Tssr149254 17 70990751 to 70990819 68 - TSS region transcription start site region 149254
Tssr149255 17 70990928 to 70990964 36 - TSS region transcription start site region 149255
Myl12a 17 70993793 to 71002533 8740 - protein coding gene myosin, light chain 12A, regulatory, non-sarcomeric
Tssr149256 17 70997919 to 70997955 36 - TSS region transcription start site region 149256
Tssr149257 17 70997981 to 70998000 19 - TSS region transcription start site region 149257
Tssr149258 17 70998010 to 70998013 3 - TSS region transcription start site region 149258
Cpgi9470 17 71001664 to 71002817 1153 CpG island CpG island 9470
Tssr149259 17 71002126 to 71002285 159 - TSS region transcription start site region 149259
Tssr149260 17 71002397 to 71002404 7 - TSS region transcription start site region 149260
Tssr149261 17 71002488 to 71002592 104 - TSS region transcription start site region 149261
Tssr149262 17 71002804 to 71002854 50 - TSS region transcription start site region 149262
Gm46596 17 71002878 to 71004872 1994 + lncRNA gene predicted gene, 46596
Myom1 17 71019002 to 71126856 107854 + protein coding gene myomesin 1
Tssr145717 17 71019283 to 71019296 13 + TSS region transcription start site region 145717
Tssr145718 17 71019333 to 71019345 12 + TSS region transcription start site region 145718
Tssr145719 17 71019481 to 71019498 17 + TSS region transcription start site region 145719
Tssr145720 17 71019503 to 71019523 20 + TSS region transcription start site region 145720
Tssr145721 17 71019524 to 71019535 11 + TSS region transcription start site region 145721
Tssr5195 17 71019541 to 71019546 5 + TSS region transcription start site region 5195
Tssr145722 17 71019548 to 71019562 14 + TSS region transcription start site region 145722
Tssr145723 17 71019583 to 71019600 17 + TSS region transcription start site region 145723
Tssr145724 17 71022863 to 71022875 12 + TSS region transcription start site region 145724
Tssr149263 17 71022964 to 71022978 14 - TSS region transcription start site region 149263
Tssr145725 17 71064103 to 71064106 3 + TSS region transcription start site region 145725
Tssr145726 17 71070654 to 71070656 2 + TSS region transcription start site region 145726
Tssr145727 17 71085352 to 71085395 43 + TSS region transcription start site region 145727
Tssr145728 17 71086162 to 71086199 37 + TSS region transcription start site region 145728
Tssr149264 17 71086567 to 71086571 4 - TSS region transcription start site region 149264
Tssr145729 17 71090369 to 71090373 4 + TSS region transcription start site region 145729
Tssr145730 17 71101551 to 71101554 3 + TSS region transcription start site region 145730
Tssr145731 17 71107529 to 71107541 12 + TSS region transcription start site region 145731
Tssr149265 17 71127538 to 71127567 29 - TSS region transcription start site region 149265
Tssr149266 17 71127568 to 71127606 38 - TSS region transcription start site region 149266
Tssr149267 17 71127617 to 71127643 26 - TSS region transcription start site region 149267
Tssr145732 17 71141372 to 71141385 13 + TSS region transcription start site region 145732
1600022D10Rik 17 71144538 to 71181987 37449 + lincRNA gene RIKEN cDNA 1600022D10 gene
Gm49910 17 71153835 to 71154020 185 - pseudogene predicted gene, 49910