Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:70843567-71693588

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228 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tgif1 17 70844205 to 70853532 9327 - protein coding gene TGFB-induced factor homeobox 1
Tssr149214 17 70844798 to 70844828 30 - TSS region transcription start site region 149214
Tssr149215 17 70845030 to 70845061 31 - TSS region transcription start site region 149215
Tssr149216 17 70845165 to 70845178 13 - TSS region transcription start site region 149216
Tssr149217 17 70846250 to 70846287 37 - TSS region transcription start site region 149217
Tssr149218 17 70846288 to 70846308 20 - TSS region transcription start site region 149218
Tssr145683 17 70846510 to 70846512 2 + TSS region transcription start site region 145683
Cpgi9466 17 70849158 to 70849899 741 CpG island CpG island 9466
Tssr149219 17 70849279 to 70849292 13 - TSS region transcription start site region 149219
Tssr145684 17 70849460 to 70849469 9 + TSS region transcription start site region 145684
Tssr149220 17 70849781 to 70849825 44 - TSS region transcription start site region 149220
Tssr145685 17 70850157 to 70850187 30 + TSS region transcription start site region 145685
Tssr149221 17 70850353 to 70850358 5 - TSS region transcription start site region 149221
Cpgi9467 17 70850492 to 70851957 1465 CpG island CpG island 9467
Tssr145686 17 70850695 to 70850720 25 + TSS region transcription start site region 145686
Tssr149222 17 70851057 to 70851068 11 - TSS region transcription start site region 149222
Tssr149223 17 70851075 to 70851087 12 - TSS region transcription start site region 149223
Tssr149224 17 70851109 to 70851118 9 - TSS region transcription start site region 149224
Tssr149225 17 70851189 to 70851216 27 - TSS region transcription start site region 149225
Tssr149226 17 70851218 to 70851232 14 - TSS region transcription start site region 149226
Tssr145687 17 70851336 to 70851364 28 + TSS region transcription start site region 145687
Tssr149227 17 70851627 to 70851643 16 - TSS region transcription start site region 149227
Tssr149228 17 70851710 to 70851738 28 - TSS region transcription start site region 149228
Tssr149229 17 70851756 to 70851774 18 - TSS region transcription start site region 149229
Tssr149230 17 70851886 to 70851893 7 - TSS region transcription start site region 149230
Tssr145688 17 70852015 to 70852023 8 + TSS region transcription start site region 145688
Tssr149231 17 70852232 to 70852261 29 - TSS region transcription start site region 149231
Tssr149232 17 70852275 to 70852284 9 - TSS region transcription start site region 149232
Tssr145689 17 70852405 to 70852431 26 + TSS region transcription start site region 145689
Cpgi9468 17 70852541 to 70853553 1012 CpG island CpG island 9468
Tssr145690 17 70852731 to 70852742 11 + TSS region transcription start site region 145690
Tssr145691 17 70852751 to 70852770 19 + TSS region transcription start site region 145691
Tssr145692 17 70852795 to 70852806 11 + TSS region transcription start site region 145692
Tssr149233 17 70852795 to 70852808 13 - TSS region transcription start site region 149233
Tssr145693 17 70853000 to 70853011 11 + TSS region transcription start site region 145693
Tssr145694 17 70853100 to 70853133 33 + TSS region transcription start site region 145694
Tssr149234 17 70853175 to 70853184 9 - TSS region transcription start site region 149234
Tssr149235 17 70853472 to 70853473 1 - TSS region transcription start site region 149235
Tssr149236 17 70853482 to 70853537 55 - TSS region transcription start site region 149236
Tssr149237 17 70853551 to 70853560 9 - TSS region transcription start site region 149237
Tssr149238 17 70853642 to 70853645 3 - TSS region transcription start site region 149238
Gm36856 17 70853642 to 70854698 1056 + lncRNA gene predicted gene, 36856
Tssr145695 17 70853743 to 70853760 17 + TSS region transcription start site region 145695
Tssr145696 17 70858589 to 70858599 10 + TSS region transcription start site region 145696
Mir1195 17 70860503 to 70860600 97 - miRNA gene microRNA 1195
Tssr145697 17 70865114 to 70865115 1 + TSS region transcription start site region 145697
Tssr145698 17 70865691 to 70865708 17 + TSS region transcription start site region 145698
Tssr145699 17 70870746 to 70870760 14 + TSS region transcription start site region 145699
Tssr145700 17 70871928 to 70871930 2 + TSS region transcription start site region 145700
Tssr149239 17 70873421 to 70873438 17 - TSS region transcription start site region 149239
Tssr145701 17 70873507 to 70873554 47 + TSS region transcription start site region 145701
Tssr149240 17 70874809 to 70874822 13 - TSS region transcription start site region 149240
Gm9320 17 70875809 to 70876313 504 + pseudogene predicted gene 9320
Tssr145702 17 70875809 to 70875812 3 + TSS region transcription start site region 145702
Gm26510 17 70876689 to 70925074 48385 - lincRNA gene predicted gene, 26510
Gm26561 17 70878078 to 71393284 515206 + lincRNA gene predicted gene, 26561
Gm49902 17 70891029 to 70892909 1880 - unclassified gene predicted gene, 49902
Tssr149241 17 70892864 to 70892881 17 - TSS region transcription start site region 149241
Tssr145703 17 70900970 to 70900979 9 + TSS region transcription start site region 145703
Tssr145704 17 70900991 to 70901007 16 + TSS region transcription start site region 145704
Tssr145705 17 70901035 to 70901047 12 + TSS region transcription start site region 145705
Tssr149242 17 70919854 to 70919889 35 - TSS region transcription start site region 149242
Tssr149243 17 70919896 to 70919919 23 - TSS region transcription start site region 149243
Tssr149244 17 70920011 to 70920017 6 - TSS region transcription start site region 149244
Tssr149245 17 70921756 to 70921765 9 - TSS region transcription start site region 149245
Tssr149246 17 70924958 to 70925003 45 - TSS region transcription start site region 149246
Gm49904 17 70926202 to 70926532 330 - pseudogene predicted gene, 49904
Tssr145706 17 70929006 to 70929007 1 + TSS region transcription start site region 145706
Gm16519 17 70929058 to 70929546 488 + pseudogene predicted gene, 16519
Gm46595 17 70944702 to 70970639 25937 - lncRNA gene predicted gene, 46595
Gm49905 17 70957124 to 70957920 796 + pseudogene predicted gene, 49905
Tssr145707 17 70963659 to 70963667 8 + TSS region transcription start site region 145707
Tssr145708 17 70963701 to 70963738 37 + TSS region transcription start site region 145708
Tssr145709 17 70963773 to 70963803 30 + TSS region transcription start site region 145709
Tssr145710 17 70963805 to 70963818 13 + TSS region transcription start site region 145710
Tssr145711 17 70963823 to 70963837 14 + TSS region transcription start site region 145711
Tssr145712 17 70967872 to 70967894 22 + TSS region transcription start site region 145712
Gm41611 17 70967886 to 70971805 3919 + lincRNA gene predicted gene, 41611
Myl12b 17 70973963 to 70990516 16553 - protein coding gene myosin, light chain 12B, regulatory
Gm49909 17 70974119 to 71002208 28089 - protein coding gene predicted gene, 49909
Tssr145713 17 70974184 to 70974197 13 + TSS region transcription start site region 145713
Tssr149247 17 70974194 to 70974227 33 - TSS region transcription start site region 149247
Tssr145714 17 70974232 to 70974261 29 + TSS region transcription start site region 145714
Tssr149248 17 70978508 to 70978557 49 - TSS region transcription start site region 149248
Tssr145715 17 70986308 to 70986317 9 + TSS region transcription start site region 145715
Tssr149249 17 70987067 to 70987072 5 - TSS region transcription start site region 149249
Tssr145716 17 70988481 to 70988487 6 + TSS region transcription start site region 145716
Cpgi9469 17 70990052 to 70991112 1060 CpG island CpG island 9469
Tssr149250 17 70990507 to 70990548 41 - TSS region transcription start site region 149250
Tssr149251 17 70990549 to 70990562 13 - TSS region transcription start site region 149251
Tssr149252 17 70990691 to 70990704 13 - TSS region transcription start site region 149252
Tssr149253 17 70990717 to 70990727 10 - TSS region transcription start site region 149253
Tssr149254 17 70990751 to 70990819 68 - TSS region transcription start site region 149254
Tssr149255 17 70990928 to 70990964 36 - TSS region transcription start site region 149255
Myl12a 17 70993793 to 71002533 8740 - protein coding gene myosin, light chain 12A, regulatory, non-sarcomeric
Tssr149256 17 70997919 to 70997955 36 - TSS region transcription start site region 149256
Tssr149257 17 70997981 to 70998000 19 - TSS region transcription start site region 149257
Tssr149258 17 70998010 to 70998013 3 - TSS region transcription start site region 149258
Cpgi9470 17 71001664 to 71002817 1153 CpG island CpG island 9470
Tssr149259 17 71002126 to 71002285 159 - TSS region transcription start site region 149259
Tssr149260 17 71002397 to 71002404 7 - TSS region transcription start site region 149260
Tssr149261 17 71002488 to 71002592 104 - TSS region transcription start site region 149261
Tssr149262 17 71002804 to 71002854 50 - TSS region transcription start site region 149262
Gm46596 17 71002878 to 71004872 1994 + lncRNA gene predicted gene, 46596
Myom1 17 71019002 to 71126856 107854 + protein coding gene myomesin 1
Tssr145717 17 71019283 to 71019296 13 + TSS region transcription start site region 145717
Tssr145718 17 71019333 to 71019345 12 + TSS region transcription start site region 145718
Tssr145719 17 71019481 to 71019498 17 + TSS region transcription start site region 145719
Tssr145720 17 71019503 to 71019523 20 + TSS region transcription start site region 145720
Tssr145721 17 71019524 to 71019535 11 + TSS region transcription start site region 145721
Tssr5195 17 71019541 to 71019546 5 + TSS region transcription start site region 5195
Tssr145722 17 71019548 to 71019562 14 + TSS region transcription start site region 145722
Tssr145723 17 71019583 to 71019600 17 + TSS region transcription start site region 145723
Tssr145724 17 71022863 to 71022875 12 + TSS region transcription start site region 145724
Tssr149263 17 71022964 to 71022978 14 - TSS region transcription start site region 149263
Tssr145725 17 71064103 to 71064106 3 + TSS region transcription start site region 145725
Tssr145726 17 71070654 to 71070656 2 + TSS region transcription start site region 145726
Tssr145727 17 71085352 to 71085395 43 + TSS region transcription start site region 145727
Tssr145728 17 71086162 to 71086199 37 + TSS region transcription start site region 145728
Tssr149264 17 71086567 to 71086571 4 - TSS region transcription start site region 149264
Tssr145729 17 71090369 to 71090373 4 + TSS region transcription start site region 145729
Tssr145730 17 71101551 to 71101554 3 + TSS region transcription start site region 145730
Tssr145731 17 71107529 to 71107541 12 + TSS region transcription start site region 145731
Tssr149265 17 71127538 to 71127567 29 - TSS region transcription start site region 149265
Tssr149266 17 71127568 to 71127606 38 - TSS region transcription start site region 149266
Tssr149267 17 71127617 to 71127643 26 - TSS region transcription start site region 149267
Tssr145732 17 71141372 to 71141385 13 + TSS region transcription start site region 145732
1600022D10Rik 17 71144538 to 71181987 37449 + lincRNA gene RIKEN cDNA 1600022D10 gene
Gm49910 17 71153835 to 71154020 185 - pseudogene predicted gene, 49910
Tssr145733 17 71179181 to 71179194 13 + TSS region transcription start site region 145733
Tssr145734 17 71182589 to 71182596 7 + TSS region transcription start site region 145734
Cpgi9471 17 71182924 to 71184595 1671 CpG island CpG island 9471
Lpin2 17 71183527 to 71249818 66291 + protein coding gene lipin 2
Tssr145735 17 71183545 to 71183570 25 + TSS region transcription start site region 145735
Tssr145736 17 71183576 to 71183598 22 + TSS region transcription start site region 145736
Tssr145737 17 71183601 to 71183610 9 + TSS region transcription start site region 145737
Tssr145738 17 71183704 to 71183715 11 + TSS region transcription start site region 145738
Tssr145739 17 71198649 to 71198653 4 + TSS region transcription start site region 145739
Tssr145740 17 71204531 to 71204554 23 + TSS region transcription start site region 145740
Tssr145741 17 71204573 to 71204591 18 + TSS region transcription start site region 145741
Tssr145742 17 71204633 to 71204641 8 + TSS region transcription start site region 145742
Tssr145743 17 71204647 to 71204693 46 + TSS region transcription start site region 145743
Tssr145744 17 71204698 to 71204701 3 + TSS region transcription start site region 145744
Tssr145745 17 71214796 to 71214838 42 + TSS region transcription start site region 145745
Tssr145746 17 71220202 to 71220211 9 + TSS region transcription start site region 145746
Tssr145747 17 71238497 to 71238501 4 + TSS region transcription start site region 145747
Emilin2 17 71252172 to 71311633 59461 - protein coding gene elastin microfibril interfacer 2
Tssr149268 17 71256347 to 71256364 17 - TSS region transcription start site region 149268
Tssr149269 17 71256834 to 71256845 11 - TSS region transcription start site region 149269
Tssr149270 17 71256851 to 71256862 11 - TSS region transcription start site region 149270
Tssr149271 17 71256863 to 71256878 15 - TSS region transcription start site region 149271
Tssr149272 17 71256885 to 71256930 45 - TSS region transcription start site region 149272
Tssr149273 17 71257242 to 71257259 17 - TSS region transcription start site region 149273
Tssr145748 17 71259995 to 71260006 11 + TSS region transcription start site region 145748
Tssr149274 17 71263029 to 71263033 4 - TSS region transcription start site region 149274
Tssr149275 17 71268567 to 71268588 21 - TSS region transcription start site region 149275
Tssr149276 17 71268589 to 71268604 15 - TSS region transcription start site region 149276
Tssr149277 17 71268620 to 71268631 11 - TSS region transcription start site region 149277
Tssr149278 17 71270312 to 71270354 42 - TSS region transcription start site region 149278
Cpgi9472 17 71274266 to 71274688 422 CpG island CpG island 9472
Tssr149279 17 71300922 to 71300937 15 - TSS region transcription start site region 149279
Cpgi9473 17 71310093 to 71311359 1266 CpG island CpG island 9473
Tssr149280 17 71310833 to 71310844 11 - TSS region transcription start site region 149280
Tssr149281 17 71310899 to 71310917 18 - TSS region transcription start site region 149281
Tssr149282 17 71310925 to 71310947 22 - TSS region transcription start site region 149282
Tssr149283 17 71310952 to 71310969 17 - TSS region transcription start site region 149283
Tssr149284 17 71310975 to 71310995 20 - TSS region transcription start site region 149284
Tssr145749 17 71311010 to 71311057 47 + TSS region transcription start site region 145749
Tssr145750 17 71315440 to 71315459 19 + TSS region transcription start site region 145750
4930471L23Rik 17 71315456 to 71339746 24290 + lincRNA gene RIKEN cDNA 4930471L23 gene
D17Mit159 17 71317684 to 71317833 149 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 159
Gm4566 17 71333201 to 71341804 8603 - pseudogene predicted gene 4566
Smchd1 17 71344489 to 71475343 130854 - protein coding gene SMC hinge domain containing 1
Gm37639 17 71366052 to 71368836 2784 - unclassified gene predicted gene, 37639
Gm38220 17 71391838 to 71393284 1446 - unclassified gene predicted gene, 38220
Gm49916 17 71421547 to 71421697 150 + pseudogene predicted gene, 49916
Tssr149285 17 71452878 to 71452883 5 - TSS region transcription start site region 149285
Tssr149286 17 71455668 to 71455685 17 - TSS region transcription start site region 149286
D17Wsu164e 17 71458201 to 71458436 235 DNA segment DNA segment, Chr 17, Wayne State University 164, expressed
Gm4707 17 71458327 to 71459918 1591 - pseudogene predicted gene 4707
Cpgi9474 17 71474581 to 71476097 1516 CpG island CpG island 9474
Tssr149287 17 71475285 to 71475340 55 - TSS region transcription start site region 149287
Tssr149288 17 71475348 to 71475359 11 - TSS region transcription start site region 149288
Tssr149289 17 71475360 to 71475371 11 - TSS region transcription start site region 149289
Tssr149290 17 71475477 to 71475505 28 - TSS region transcription start site region 149290
Tssr149291 17 71475515 to 71475526 11 - TSS region transcription start site region 149291
Tssr149292 17 71475891 to 71475903 12 - TSS region transcription start site region 149292
Gm18738 17 71483392 to 71483914 522 + pseudogene predicted gene, 18738
Tssr149293 17 71486336 to 71486361 25 - TSS region transcription start site region 149293
Ndc80 17 71496100 to 71526857 30757 - protein coding gene NDC80 kinetochore complex component
Gm23115 17 71506436 to 71506543 107 - rRNA gene predicted gene, 23115
Cpgi9475 17 71526385 to 71527360 975 CpG island CpG island 9475
Tssr149294 17 71526758 to 71526817 59 - TSS region transcription start site region 149294
Tssr149295 17 71526819 to 71526837 18 - TSS region transcription start site region 149295
Mettl4-ps1 17 71528986 to 71544207 15221 + pseudogene methyltransferase like 4, pseudogene 1
Cpgi9476 17 71551590 to 71552608 1018 CpG island CpG island 9476
Tssr145751 17 71552031 to 71552079 48 + TSS region transcription start site region 145751
Spdya 17 71552061 to 71589533 37472 + protein coding gene speedy/RINGO cell cycle regulator family, member A
Tssr145752 17 71552083 to 71552094 11 + TSS region transcription start site region 145752
Trmt61b 17 71557027 to 71598755 41728 - unclassified non-coding RNA gene tRNA methyltransferase 61B