Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:70660054-70850083

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dlgap1 17 69969073 to 70821413 852340 + protein coding gene DLG associated protein 1
Cpgi9460 17 70662410 to 70662899 489 CpG island CpG island 9460
Tssr145666 17 70662732 to 70662757 25 + TSS region transcription start site region 145666
Gm36746 17 70672806 to 70757443 84637 - lncRNA gene predicted gene, 36746
Tssr149188 17 70679896 to 70679913 17 - TSS region transcription start site region 149188
Tssr149189 17 70687497 to 70687499 2 - TSS region transcription start site region 149189
Tssr145667 17 70694459 to 70694463 4 + TSS region transcription start site region 145667
D17Mit160 17 70728913 to 70729038 125 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 160
Tssr149190 17 70740116 to 70740119 3 - TSS region transcription start site region 149190
5031415H12Rik 17 70745329 to 70755582 10253 - antisense lncRNA gene RIKEN cDNA 5031415H12 gene
Tssr149191 17 70746883 to 70746890 7 - TSS region transcription start site region 149191
Tssr145668 17 70747067 to 70747074 7 + TSS region transcription start site region 145668
Tssr145669 17 70747308 to 70747313 5 + TSS region transcription start site region 145669
Tssr149192 17 70747707 to 70747731 24 - TSS region transcription start site region 149192
Tssr145670 17 70748000 to 70748019 19 + TSS region transcription start site region 145670
Tssr145671 17 70748089 to 70748103 14 + TSS region transcription start site region 145671
Tssr145672 17 70748296 to 70748329 33 + TSS region transcription start site region 145672
Tssr145673 17 70751335 to 70751365 30 + TSS region transcription start site region 145673
Tssr145674 17 70751404 to 70751419 15 + TSS region transcription start site region 145674
Tssr149193 17 70753271 to 70753293 22 - TSS region transcription start site region 149193
Tssr149194 17 70753451 to 70753461 10 - TSS region transcription start site region 149194
Tssr149195 17 70753511 to 70753517 6 - TSS region transcription start site region 149195
Cpgi9461 17 70755030 to 70755221 191 CpG island CpG island 9461
Tssr149196 17 70755054 to 70755083 29 - TSS region transcription start site region 149196
Tssr149197 17 70755441 to 70755474 33 - TSS region transcription start site region 149197
Tssr145675 17 70756011 to 70756025 14 + TSS region transcription start site region 145675
Tssr145676 17 70756042 to 70756053 11 + TSS region transcription start site region 145676
Tssr145677 17 70756085 to 70756090 5 + TSS region transcription start site region 145677
Tssr149198 17 70761393 to 70761406 13 - TSS region transcription start site region 149198
Gm41609 17 70765839 to 70806059 40220 - lncRNA gene predicted gene, 41609
Cpgi9462 17 70766102 to 70766263 161 CpG island CpG island 9462
Tssr149199 17 70805985 to 70806005 20 - TSS region transcription start site region 149199
Cpgi9463 17 70817921 to 70818756 835 CpG island CpG island 9463
Tssr145678 17 70819672 to 70819682 10 + TSS region transcription start site region 145678
Tssr149200 17 70819782 to 70819786 4 - TSS region transcription start site region 149200
Tssr149201 17 70819897 to 70819907 10 - TSS region transcription start site region 149201
Cpgi9464 17 70823489 to 70823682 193 CpG island CpG island 9464
Tssr149202 17 70827718 to 70827740 22 - TSS region transcription start site region 149202
Tssr149203 17 70829959 to 70829969 10 - TSS region transcription start site region 149203
Tssr149204 17 70829981 to 70830011 30 - TSS region transcription start site region 149204
Tssr145679 17 70830190 to 70830219 29 + TSS region transcription start site region 145679
Tssr149205 17 70834491 to 70834502 11 - TSS region transcription start site region 149205
Tssr149206 17 70834528 to 70834553 25 - TSS region transcription start site region 149206
Cpgi9465 17 70834535 to 70834794 259 CpG island CpG island 9465
Tssr149207 17 70834561 to 70834573 12 - TSS region transcription start site region 149207
Tssr145680 17 70834620 to 70834674 54 + TSS region transcription start site region 145680
Gm20703 17 70834664 to 70836044 1380 + lincRNA gene predicted gene 20703
Tssr145681 17 70834742 to 70834749 7 + TSS region transcription start site region 145681
Tssr149208 17 70834801 to 70834827 26 - TSS region transcription start site region 149208
Tssr149209 17 70834830 to 70834855 25 - TSS region transcription start site region 149209
Tssr145682 17 70834942 to 70834957 15 + TSS region transcription start site region 145682
Gm41610 17 70838514 to 70842088 3574 - lncRNA gene predicted gene, 41610
Tssr149210 17 70840864 to 70840879 15 - TSS region transcription start site region 149210
Tssr149211 17 70840910 to 70840956 46 - TSS region transcription start site region 149211
Tssr149212 17 70842097 to 70842100 3 - TSS region transcription start site region 149212
Tssr149213 17 70842506 to 70842508 2 - TSS region transcription start site region 149213
Tgif1 17 70844205 to 70853532 9327 - protein coding gene TGFB-induced factor homeobox 1
Tssr149214 17 70844798 to 70844828 30 - TSS region transcription start site region 149214
Tssr149215 17 70845030 to 70845061 31 - TSS region transcription start site region 149215
Tssr149216 17 70845165 to 70845178 13 - TSS region transcription start site region 149216
Tssr149217 17 70846250 to 70846287 37 - TSS region transcription start site region 149217
Tssr149218 17 70846288 to 70846308 20 - TSS region transcription start site region 149218
Tssr145683 17 70846510 to 70846512 2 + TSS region transcription start site region 145683
Cpgi9466 17 70849158 to 70849899 741 CpG island CpG island 9466
Tssr149219 17 70849279 to 70849292 13 - TSS region transcription start site region 149219
Tssr145684 17 70849460 to 70849469 9 + TSS region transcription start site region 145684
Tssr149220 17 70849781 to 70849825 44 - TSS region transcription start site region 149220