Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:70191712-70851738

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dlgap1 17 69969073 to 70821413 852340 + protein coding gene DLG associated protein 1
Gm6393 17 70392597 to 70393569 972 - pseudogene predicted gene 6393
Tssr149187 17 70393556 to 70393560 4 - TSS region transcription start site region 149187
Gm6399 17 70400134 to 70400774 640 + pseudogene predicted gene 6399
Cpgi9457 17 70515976 to 70516857 881 CpG island CpG island 9457
Tssr145656 17 70521656 to 70521698 42 + TSS region transcription start site region 145656
Tssr145657 17 70521712 to 70521738 26 + TSS region transcription start site region 145657
Tssr145658 17 70521759 to 70521768 9 + TSS region transcription start site region 145658
Tssr145659 17 70521965 to 70521972 7 + TSS region transcription start site region 145659
Tssr145660 17 70522083 to 70522144 61 + TSS region transcription start site region 145660
Tssr145661 17 70522149 to 70522169 20 + TSS region transcription start site region 145661
Tssr145662 17 70529154 to 70529162 8 + TSS region transcription start site region 145662
Tssr145663 17 70534575 to 70534585 10 + TSS region transcription start site region 145663
Tssr145664 17 70561739 to 70561750 11 + TSS region transcription start site region 145664
Gm46581 17 70584358 to 70590001 5643 - lncRNA gene predicted gene, 46581
Cpgi9458 17 70593194 to 70593354 160 CpG island CpG island 9458
Tssr145665 17 70657450 to 70657475 25 + TSS region transcription start site region 145665
Cpgi9459 17 70657528 to 70657873 345 CpG island CpG island 9459
Cpgi9460 17 70662410 to 70662899 489 CpG island CpG island 9460
Tssr145666 17 70662732 to 70662757 25 + TSS region transcription start site region 145666
Gm36746 17 70672806 to 70757443 84637 - lncRNA gene predicted gene, 36746
Tssr149188 17 70679896 to 70679913 17 - TSS region transcription start site region 149188
Tssr149189 17 70687497 to 70687499 2 - TSS region transcription start site region 149189
Tssr145667 17 70694459 to 70694463 4 + TSS region transcription start site region 145667
D17Mit160 17 70728913 to 70729038 125 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 160
Tssr149190 17 70740116 to 70740119 3 - TSS region transcription start site region 149190
5031415H12Rik 17 70745329 to 70755582 10253 - antisense lncRNA gene RIKEN cDNA 5031415H12 gene
Tssr149191 17 70746883 to 70746890 7 - TSS region transcription start site region 149191
Tssr145668 17 70747067 to 70747074 7 + TSS region transcription start site region 145668
Tssr145669 17 70747308 to 70747313 5 + TSS region transcription start site region 145669
Tssr149192 17 70747707 to 70747731 24 - TSS region transcription start site region 149192
Tssr145670 17 70748000 to 70748019 19 + TSS region transcription start site region 145670
Tssr145671 17 70748089 to 70748103 14 + TSS region transcription start site region 145671
Tssr145672 17 70748296 to 70748329 33 + TSS region transcription start site region 145672
Tssr145673 17 70751335 to 70751365 30 + TSS region transcription start site region 145673
Tssr145674 17 70751404 to 70751419 15 + TSS region transcription start site region 145674
Tssr149193 17 70753271 to 70753293 22 - TSS region transcription start site region 149193
Tssr149194 17 70753451 to 70753461 10 - TSS region transcription start site region 149194
Tssr149195 17 70753511 to 70753517 6 - TSS region transcription start site region 149195
Cpgi9461 17 70755030 to 70755221 191 CpG island CpG island 9461
Tssr149196 17 70755054 to 70755083 29 - TSS region transcription start site region 149196
Tssr149197 17 70755441 to 70755474 33 - TSS region transcription start site region 149197
Tssr145675 17 70756011 to 70756025 14 + TSS region transcription start site region 145675
Tssr145676 17 70756042 to 70756053 11 + TSS region transcription start site region 145676
Tssr145677 17 70756085 to 70756090 5 + TSS region transcription start site region 145677
Tssr149198 17 70761393 to 70761406 13 - TSS region transcription start site region 149198
Gm41609 17 70765839 to 70806059 40220 - lncRNA gene predicted gene, 41609
Cpgi9462 17 70766102 to 70766263 161 CpG island CpG island 9462
Tssr149199 17 70805985 to 70806005 20 - TSS region transcription start site region 149199
Cpgi9463 17 70817921 to 70818756 835 CpG island CpG island 9463
Tssr145678 17 70819672 to 70819682 10 + TSS region transcription start site region 145678
Tssr149200 17 70819782 to 70819786 4 - TSS region transcription start site region 149200
Tssr149201 17 70819897 to 70819907 10 - TSS region transcription start site region 149201
Cpgi9464 17 70823489 to 70823682 193 CpG island CpG island 9464
Tssr149202 17 70827718 to 70827740 22 - TSS region transcription start site region 149202
Tssr149203 17 70829959 to 70829969 10 - TSS region transcription start site region 149203
Tssr149204 17 70829981 to 70830011 30 - TSS region transcription start site region 149204
Tssr145679 17 70830190 to 70830219 29 + TSS region transcription start site region 145679
Tssr149205 17 70834491 to 70834502 11 - TSS region transcription start site region 149205
Tssr149206 17 70834528 to 70834553 25 - TSS region transcription start site region 149206
Cpgi9465 17 70834535 to 70834794 259 CpG island CpG island 9465
Tssr149207 17 70834561 to 70834573 12 - TSS region transcription start site region 149207
Tssr145680 17 70834620 to 70834674 54 + TSS region transcription start site region 145680
Gm20703 17 70834664 to 70836044 1380 + lincRNA gene predicted gene 20703
Tssr145681 17 70834742 to 70834749 7 + TSS region transcription start site region 145681
Tssr149208 17 70834801 to 70834827 26 - TSS region transcription start site region 149208
Tssr149209 17 70834830 to 70834855 25 - TSS region transcription start site region 149209
Tssr145682 17 70834942 to 70834957 15 + TSS region transcription start site region 145682
Gm41610 17 70838514 to 70842088 3574 - lncRNA gene predicted gene, 41610
Tssr149210 17 70840864 to 70840879 15 - TSS region transcription start site region 149210
Tssr149211 17 70840910 to 70840956 46 - TSS region transcription start site region 149211
Tssr149212 17 70842097 to 70842100 3 - TSS region transcription start site region 149212
Tssr149213 17 70842506 to 70842508 2 - TSS region transcription start site region 149213
Tgif1 17 70844205 to 70853532 9327 - protein coding gene TGFB-induced factor homeobox 1
Tssr149214 17 70844798 to 70844828 30 - TSS region transcription start site region 149214
Tssr149215 17 70845030 to 70845061 31 - TSS region transcription start site region 149215
Tssr149216 17 70845165 to 70845178 13 - TSS region transcription start site region 149216
Tssr149217 17 70846250 to 70846287 37 - TSS region transcription start site region 149217
Tssr149218 17 70846288 to 70846308 20 - TSS region transcription start site region 149218
Tssr145683 17 70846510 to 70846512 2 + TSS region transcription start site region 145683
Cpgi9466 17 70849158 to 70849899 741 CpG island CpG island 9466
Tssr149219 17 70849279 to 70849292 13 - TSS region transcription start site region 149219
Tssr145684 17 70849460 to 70849469 9 + TSS region transcription start site region 145684
Tssr149220 17 70849781 to 70849825 44 - TSS region transcription start site region 149220
Tssr145685 17 70850157 to 70850187 30 + TSS region transcription start site region 145685
Tssr149221 17 70850353 to 70850358 5 - TSS region transcription start site region 149221
Cpgi9467 17 70850492 to 70851957 1465 CpG island CpG island 9467
Tssr145686 17 70850695 to 70850720 25 + TSS region transcription start site region 145686
Tssr149222 17 70851057 to 70851068 11 - TSS region transcription start site region 149222
Tssr149223 17 70851075 to 70851087 12 - TSS region transcription start site region 149223
Tssr149224 17 70851109 to 70851118 9 - TSS region transcription start site region 149224
Tssr149225 17 70851189 to 70851216 27 - TSS region transcription start site region 149225
Tssr149226 17 70851218 to 70851232 14 - TSS region transcription start site region 149226
Tssr145687 17 70851336 to 70851364 28 + TSS region transcription start site region 145687
Tssr149227 17 70851627 to 70851643 16 - TSS region transcription start site region 149227
Tssr149228 17 70851710 to 70851738 28 - TSS region transcription start site region 149228