Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:69284118-69804268

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Epb41l3 17 69075683 to 69289989 214306 + protein coding gene erythrocyte membrane protein band 4.1 like 3
Tssr145637 17 69289670 to 69289688 18 + TSS region transcription start site region 145637
Tssr145638 17 69289719 to 69289727 8 + TSS region transcription start site region 145638
Gm36487 17 69315994 to 69344713 28719 + lincRNA gene predicted gene, 36487
Cpgi9451 17 69382037 to 69384534 2497 CpG island CpG island 9451
Gm49894 17 69382204 to 69384208 2004 - lincRNA gene predicted gene, 49894
Tssr145639 17 69382797 to 69382813 16 + TSS region transcription start site region 145639
Tssr145640 17 69383024 to 69383065 41 + TSS region transcription start site region 145640
Zbtb14 17 69383050 to 69391199 8149 + protein coding gene zinc finger and BTB domain containing 14
Tssr145641 17 69383350 to 69383394 44 + TSS region transcription start site region 145641
Tssr145642 17 69383768 to 69383789 21 + TSS region transcription start site region 145642
Tssr149184 17 69384171 to 69384215 44 - TSS region transcription start site region 149184
C030034I22Rik 17 69416447 to 69419193 2746 + lincRNA gene RIKEN cDNA C030034I22 gene
A930029G22Rik 17 69416660 to 69439304 22644 - lincRNA gene RIKEN cDNA A930029G22 gene
Cpgi9452 17 69417049 to 69418122 1073 CpG island CpG island 9452
Tssr149185 17 69417291 to 69417303 12 - TSS region transcription start site region 149185
Tssr145643 17 69417374 to 69417419 45 + TSS region transcription start site region 145643
Tssr145644 17 69417441 to 69417465 24 + TSS region transcription start site region 145644
Tssr145645 17 69421803 to 69421845 42 + TSS region transcription start site region 145645
D17Mit256 17 69426488 to 69426611 123 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 256
Cpgi9453 17 69438732 to 69440276 1544 CpG island CpG island 9453
Akain1 17 69439326 to 69489233 49907 + protein coding gene A kinase (PRKA) anchor inhibitor 1
A730049N16Rik 17 69473605 to 69475875 2270 - antisense lncRNA gene RIKEN cDNA A730049N16 gene
Cpgi9454 17 69475427 to 69475739 312 CpG island CpG island 9454
D17Mit169 17 69544118 to 69544268 150 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 169
Gm9319 17 69554230 to 69554761 531 + pseudogene predicted gene 9319
Gm9598 17 69570406 to 69571181 775 + pseudogene predicted gene 9598
Gm22967 17 69594539 to 69594777 238 - unclassified non-coding RNA gene predicted gene, 22967
Cpgi9455 17 69605277 to 69605446 169 CpG island CpG island 9455
Gm49895 17 69766903 to 69776012 9109 - lincRNA gene predicted gene, 49895
Tssr149186 17 69776007 to 69776013 6 - TSS region transcription start site region 149186