Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:68389248-69359252

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
L3mbtl4 17 68273797 to 68780086 506289 + protein coding gene L3MBTL4 histone methyl-lysine binding protein
Tssr5194 17 68406201 to 68406202 1 + TSS region transcription start site region 5194
D17Mit185 17 68451430 to 68451617 187 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 185
Bmch7 17 68451430 to 68451617 187 QTL bone mechanical trait 7
Chlq9 17 68451430 to 68451617 187 QTL circulating hormone level QTL 9
D17Mit205 17 68629147 to 68629369 222 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 205
Gm17921 17 68698911 to 68700327 1416 + pseudogene predicted gene, 17921
Gm38593 17 68829835 to 68837155 7320 - antisense lncRNA gene predicted gene, 38593
Cpgi9444 17 68836719 to 68837860 1141 CpG island CpG island 9444
Tssr145621 17 68837062 to 68837093 31 + TSS region transcription start site region 145621
Tmem200c 17 68837136 to 68843138 6002 + protein coding gene transmembrane protein 200C
Cpgi9445 17 68840795 to 68842246 1451 CpG island CpG island 9445
Gm49949 17 68844025 to 68846527 2502 + unclassified gene predicted gene, 49949
Gm36392 17 68847558 to 68874356 26798 - lncRNA gene predicted gene, 36392
Cpgi9446 17 68851336 to 68851496 160 CpG island CpG island 9446
Tssr149182 17 68874248 to 68874252 4 - TSS region transcription start site region 149182
Gm36437 17 68980559 to 68987121 6562 - lncRNA gene predicted gene, 36437
Cpgi9447 17 69075519 to 69076896 1377 CpG island CpG island 9447
Tssr145622 17 69075672 to 69075691 19 + TSS region transcription start site region 145622
Epb41l3 17 69075683 to 69289989 214306 + protein coding gene erythrocyte membrane protein band 4.1 like 3
Tssr145623 17 69075699 to 69075745 46 + TSS region transcription start site region 145623
D17Mit271 17 69112086 to 69112214 128 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology-271
Tssr145624 17 69127399 to 69127409 10 + TSS region transcription start site region 145624
Tssr145625 17 69127414 to 69127445 31 + TSS region transcription start site region 145625
Tssr145626 17 69127450 to 69127462 12 + TSS region transcription start site region 145626
Tssr145627 17 69156506 to 69156514 8 + TSS region transcription start site region 145627
Cpgi9448 17 69156526 to 69157778 1252 CpG island CpG island 9448
Tssr145628 17 69156553 to 69156564 11 + TSS region transcription start site region 145628
Tssr145629 17 69156600 to 69156607 7 + TSS region transcription start site region 145629
Tssr145630 17 69156791 to 69156850 59 + TSS region transcription start site region 145630
Tssr145631 17 69156853 to 69156860 7 + TSS region transcription start site region 145631
Tssr145632 17 69159965 to 69159991 26 + TSS region transcription start site region 145632
Tssr145633 17 69159997 to 69160014 17 + TSS region transcription start site region 145633
Cpgi9449 17 69176764 to 69177194 430 CpG island CpG island 9449
Tssr145634 17 69262107 to 69262116 9 + TSS region transcription start site region 145634
Tssr145635 17 69262189 to 69262268 79 + TSS region transcription start site region 145635
Tssr145636 17 69262276 to 69262286 10 + TSS region transcription start site region 145636
Tssr149183 17 69274601 to 69274605 4 - TSS region transcription start site region 149183
2410021H03Rik 17 69275362 to 69277206 1844 - antisense lncRNA gene RIKEN cDNA 2410021H03 gene
Cpgi9450 17 69282735 to 69283339 604 CpG island CpG island 9450
Tssr145637 17 69289670 to 69289688 18 + TSS region transcription start site region 145637
Tssr145638 17 69289719 to 69289727 8 + TSS region transcription start site region 145638
Gm36487 17 69315994 to 69344713 28719 + lincRNA gene predicted gene, 36487