Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:68220683-70144989

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mbis4 17 34956841 to 69858931 34902090 QTL Mycobacterium bovis-induced systemic lupus erythematosus 4
Cpgi9443 17 68273527 to 68274327 800 CpG island CpG island 9443
L3mbtl4 17 68273797 to 68780086 506289 + protein coding gene L3MBTL4 histone methyl-lysine binding protein
Tssr5193 17 68314572 to 68314577 5 + TSS region transcription start site region 5193
Tssr145620 17 68314595 to 68314609 14 + TSS region transcription start site region 145620
Gm15974 17 68371280 to 68371810 530 - pseudogene predicted gene 15974
Tssr5194 17 68406201 to 68406202 1 + TSS region transcription start site region 5194
D17Mit185 17 68451430 to 68451617 187 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 185
Chlq9 17 68451430 to 68451617 187 QTL circulating hormone level QTL 9
Bmch7 17 68451430 to 68451617 187 QTL bone mechanical trait 7
D17Mit205 17 68629147 to 68629369 222 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 205
Gm17921 17 68698911 to 68700327 1416 + pseudogene predicted gene, 17921
Gm38593 17 68829835 to 68837155 7320 - antisense lncRNA gene predicted gene, 38593
Cpgi9444 17 68836719 to 68837860 1141 CpG island CpG island 9444
Tssr145621 17 68837062 to 68837093 31 + TSS region transcription start site region 145621
Tmem200c 17 68837136 to 68843138 6002 + protein coding gene transmembrane protein 200C
Cpgi9445 17 68840795 to 68842246 1451 CpG island CpG island 9445
Gm49949 17 68844025 to 68846527 2502 + unclassified gene predicted gene, 49949
Gm36392 17 68847558 to 68874356 26798 - lncRNA gene predicted gene, 36392
Cpgi9446 17 68851336 to 68851496 160 CpG island CpG island 9446
Tssr149182 17 68874248 to 68874252 4 - TSS region transcription start site region 149182
Gm36437 17 68980559 to 68987121 6562 - lncRNA gene predicted gene, 36437
Cpgi9447 17 69075519 to 69076896 1377 CpG island CpG island 9447
Tssr145622 17 69075672 to 69075691 19 + TSS region transcription start site region 145622
Epb41l3 17 69075683 to 69289989 214306 + protein coding gene erythrocyte membrane protein band 4.1 like 3
Tssr145623 17 69075699 to 69075745 46 + TSS region transcription start site region 145623
D17Mit271 17 69112086 to 69112214 128 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology-271
Tssr145624 17 69127399 to 69127409 10 + TSS region transcription start site region 145624
Tssr145625 17 69127414 to 69127445 31 + TSS region transcription start site region 145625
Tssr145626 17 69127450 to 69127462 12 + TSS region transcription start site region 145626
Tssr145627 17 69156506 to 69156514 8 + TSS region transcription start site region 145627
Cpgi9448 17 69156526 to 69157778 1252 CpG island CpG island 9448
Tssr145628 17 69156553 to 69156564 11 + TSS region transcription start site region 145628
Tssr145629 17 69156600 to 69156607 7 + TSS region transcription start site region 145629
Tssr145630 17 69156791 to 69156850 59 + TSS region transcription start site region 145630
Tssr145631 17 69156853 to 69156860 7 + TSS region transcription start site region 145631
Tssr145632 17 69159965 to 69159991 26 + TSS region transcription start site region 145632
Tssr145633 17 69159997 to 69160014 17 + TSS region transcription start site region 145633
Cpgi9449 17 69176764 to 69177194 430 CpG island CpG island 9449
Tssr145634 17 69262107 to 69262116 9 + TSS region transcription start site region 145634
Tssr145635 17 69262189 to 69262268 79 + TSS region transcription start site region 145635
Tssr145636 17 69262276 to 69262286 10 + TSS region transcription start site region 145636
Tssr149183 17 69274601 to 69274605 4 - TSS region transcription start site region 149183
2410021H03Rik 17 69275362 to 69277206 1844 - antisense lncRNA gene RIKEN cDNA 2410021H03 gene
Cpgi9450 17 69282735 to 69283339 604 CpG island CpG island 9450
Tssr145637 17 69289670 to 69289688 18 + TSS region transcription start site region 145637
Tssr145638 17 69289719 to 69289727 8 + TSS region transcription start site region 145638
Gm36487 17 69315994 to 69344713 28719 + lincRNA gene predicted gene, 36487
Cpgi9451 17 69382037 to 69384534 2497 CpG island CpG island 9451
Gm49894 17 69382204 to 69384208 2004 - lincRNA gene predicted gene, 49894
Tssr145639 17 69382797 to 69382813 16 + TSS region transcription start site region 145639
Tssr145640 17 69383024 to 69383065 41 + TSS region transcription start site region 145640
Zbtb14 17 69383050 to 69391199 8149 + protein coding gene zinc finger and BTB domain containing 14
Tssr145641 17 69383350 to 69383394 44 + TSS region transcription start site region 145641
Tssr145642 17 69383768 to 69383789 21 + TSS region transcription start site region 145642
Tssr149184 17 69384171 to 69384215 44 - TSS region transcription start site region 149184
C030034I22Rik 17 69416447 to 69419193 2746 + lincRNA gene RIKEN cDNA C030034I22 gene
A930029G22Rik 17 69416660 to 69439304 22644 - lincRNA gene RIKEN cDNA A930029G22 gene
Cpgi9452 17 69417049 to 69418122 1073 CpG island CpG island 9452
Tssr149185 17 69417291 to 69417303 12 - TSS region transcription start site region 149185
Tssr145643 17 69417374 to 69417419 45 + TSS region transcription start site region 145643
Tssr145644 17 69417441 to 69417465 24 + TSS region transcription start site region 145644
Tssr145645 17 69421803 to 69421845 42 + TSS region transcription start site region 145645
D17Mit256 17 69426488 to 69426611 123 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 256
Cpgi9453 17 69438732 to 69440276 1544 CpG island CpG island 9453
Akain1 17 69439326 to 69489233 49907 + protein coding gene A kinase (PRKA) anchor inhibitor 1
A730049N16Rik 17 69473605 to 69475875 2270 - antisense lncRNA gene RIKEN cDNA A730049N16 gene
Cpgi9454 17 69475427 to 69475739 312 CpG island CpG island 9454
D17Mit169 17 69544118 to 69544268 150 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 169
Gm9319 17 69554230 to 69554761 531 + pseudogene predicted gene 9319
Gm9598 17 69570406 to 69571181 775 + pseudogene predicted gene 9598
Gm22967 17 69594539 to 69594777 238 - unclassified non-coding RNA gene predicted gene, 22967
Cpgi9455 17 69605277 to 69605446 169 CpG island CpG island 9455
Gm49895 17 69766903 to 69776012 9109 - lincRNA gene predicted gene, 49895
Tssr149186 17 69776007 to 69776013 6 - TSS region transcription start site region 149186
D17Mit240 17 69847592 to 69847699 107 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 240
D17Mit153 17 69858785 to 69858931 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 153
Gm36594 17 69894630 to 69924006 29376 - lincRNA gene predicted gene, 36594
Gm4561 17 69925327 to 69925831 504 - pseudogene predicted gene 4561
Cpgi9456 17 69968843 to 69970764 1921 CpG island CpG island 9456
Tssr145646 17 69969046 to 69969058 12 + TSS region transcription start site region 145646
Dlgap1 17 69969073 to 70821413 852340 + protein coding gene DLG associated protein 1
Tssr145647 17 69969075 to 69969086 11 + TSS region transcription start site region 145647
Tssr145648 17 69969106 to 69969125 19 + TSS region transcription start site region 145648
Tssr145649 17 69969191 to 69969202 11 + TSS region transcription start site region 145649
Tssr145650 17 69969217 to 69969234 17 + TSS region transcription start site region 145650
Tssr145651 17 69969317 to 69969326 9 + TSS region transcription start site region 145651
Tssr145652 17 69969331 to 69969343 12 + TSS region transcription start site region 145652
Tssr145653 17 69969361 to 69969378 17 + TSS region transcription start site region 145653
Tssr145654 17 69969387 to 69969440 53 + TSS region transcription start site region 145654
Tssr145655 17 69982412 to 69982414 2 + TSS region transcription start site region 145655