Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:68149538-74176987

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595 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mbis4 17 34956841 to 69858931 34902090 QTL Mycobacterium bovis-induced systemic lupus erythematosus 4
Gm49944 17 68025818 to 68173556 147738 - lincRNA gene predicted gene, 49944
Gm36252 17 68182815 to 68187543 4728 - lincRNA gene predicted gene, 36252
Tssr145618 17 68187908 to 68187920 12 + TSS region transcription start site region 145618
Tssr145619 17 68187931 to 68187949 18 + TSS region transcription start site region 145619
Gm36312 17 68187979 to 68197421 9442 + lncRNA gene predicted gene, 36312
Cpgi9443 17 68273527 to 68274327 800 CpG island CpG island 9443
L3mbtl4 17 68273797 to 68780086 506289 + protein coding gene L3MBTL4 histone methyl-lysine binding protein
Tssr5193 17 68314572 to 68314577 5 + TSS region transcription start site region 5193
Tssr145620 17 68314595 to 68314609 14 + TSS region transcription start site region 145620
Gm15974 17 68371280 to 68371810 530 - pseudogene predicted gene 15974
Tssr5194 17 68406201 to 68406202 1 + TSS region transcription start site region 5194
Chlq9 17 68451430 to 68451617 187 QTL circulating hormone level QTL 9
Bmch7 17 68451430 to 68451617 187 QTL bone mechanical trait 7
D17Mit185 17 68451430 to 68451617 187 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 185
D17Mit205 17 68629147 to 68629369 222 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 205
Gm17921 17 68698911 to 68700327 1416 + pseudogene predicted gene, 17921
Gm38593 17 68829835 to 68837155 7320 - antisense lncRNA gene predicted gene, 38593
Cpgi9444 17 68836719 to 68837860 1141 CpG island CpG island 9444
Tssr145621 17 68837062 to 68837093 31 + TSS region transcription start site region 145621
Tmem200c 17 68837136 to 68843138 6002 + protein coding gene transmembrane protein 200C
Cpgi9445 17 68840795 to 68842246 1451 CpG island CpG island 9445
Gm49949 17 68844025 to 68846527 2502 + unclassified gene predicted gene, 49949
Gm36392 17 68847558 to 68874356 26798 - lncRNA gene predicted gene, 36392
Cpgi9446 17 68851336 to 68851496 160 CpG island CpG island 9446
Tssr149182 17 68874248 to 68874252 4 - TSS region transcription start site region 149182
Gm36437 17 68980559 to 68987121 6562 - lncRNA gene predicted gene, 36437
Cpgi9447 17 69075519 to 69076896 1377 CpG island CpG island 9447
Tssr145622 17 69075672 to 69075691 19 + TSS region transcription start site region 145622
Epb41l3 17 69075683 to 69289989 214306 + protein coding gene erythrocyte membrane protein band 4.1 like 3
Tssr145623 17 69075699 to 69075745 46 + TSS region transcription start site region 145623
D17Mit271 17 69112086 to 69112214 128 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology-271
Tssr145624 17 69127399 to 69127409 10 + TSS region transcription start site region 145624
Tssr145625 17 69127414 to 69127445 31 + TSS region transcription start site region 145625
Tssr145626 17 69127450 to 69127462 12 + TSS region transcription start site region 145626
Tssr145627 17 69156506 to 69156514 8 + TSS region transcription start site region 145627
Cpgi9448 17 69156526 to 69157778 1252 CpG island CpG island 9448
Tssr145628 17 69156553 to 69156564 11 + TSS region transcription start site region 145628
Tssr145629 17 69156600 to 69156607 7 + TSS region transcription start site region 145629
Tssr145630 17 69156791 to 69156850 59 + TSS region transcription start site region 145630
Tssr145631 17 69156853 to 69156860 7 + TSS region transcription start site region 145631
Tssr145632 17 69159965 to 69159991 26 + TSS region transcription start site region 145632
Tssr145633 17 69159997 to 69160014 17 + TSS region transcription start site region 145633
Cpgi9449 17 69176764 to 69177194 430 CpG island CpG island 9449
Tssr145634 17 69262107 to 69262116 9 + TSS region transcription start site region 145634
Tssr145635 17 69262189 to 69262268 79 + TSS region transcription start site region 145635
Tssr145636 17 69262276 to 69262286 10 + TSS region transcription start site region 145636
Tssr149183 17 69274601 to 69274605 4 - TSS region transcription start site region 149183
2410021H03Rik 17 69275362 to 69277206 1844 - antisense lncRNA gene RIKEN cDNA 2410021H03 gene
Cpgi9450 17 69282735 to 69283339 604 CpG island CpG island 9450
Tssr145637 17 69289670 to 69289688 18 + TSS region transcription start site region 145637
Tssr145638 17 69289719 to 69289727 8 + TSS region transcription start site region 145638
Gm36487 17 69315994 to 69344713 28719 + lincRNA gene predicted gene, 36487
Cpgi9451 17 69382037 to 69384534 2497 CpG island CpG island 9451
Gm49894 17 69382204 to 69384208 2004 - lincRNA gene predicted gene, 49894
Tssr145639 17 69382797 to 69382813 16 + TSS region transcription start site region 145639
Tssr145640 17 69383024 to 69383065 41 + TSS region transcription start site region 145640
Zbtb14 17 69383050 to 69391199 8149 + protein coding gene zinc finger and BTB domain containing 14
Tssr145641 17 69383350 to 69383394 44 + TSS region transcription start site region 145641
Tssr145642 17 69383768 to 69383789 21 + TSS region transcription start site region 145642
Tssr149184 17 69384171 to 69384215 44 - TSS region transcription start site region 149184
C030034I22Rik 17 69416447 to 69419193 2746 + lincRNA gene RIKEN cDNA C030034I22 gene
A930029G22Rik 17 69416660 to 69439304 22644 - lincRNA gene RIKEN cDNA A930029G22 gene
Cpgi9452 17 69417049 to 69418122 1073 CpG island CpG island 9452
Tssr149185 17 69417291 to 69417303 12 - TSS region transcription start site region 149185
Tssr145643 17 69417374 to 69417419 45 + TSS region transcription start site region 145643
Tssr145644 17 69417441 to 69417465 24 + TSS region transcription start site region 145644
Tssr145645 17 69421803 to 69421845 42 + TSS region transcription start site region 145645
D17Mit256 17 69426488 to 69426611 123 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 256
Cpgi9453 17 69438732 to 69440276 1544 CpG island CpG island 9453
Akain1 17 69439326 to 69489233 49907 + protein coding gene A kinase (PRKA) anchor inhibitor 1
A730049N16Rik 17 69473605 to 69475875 2270 - antisense lncRNA gene RIKEN cDNA A730049N16 gene
Cpgi9454 17 69475427 to 69475739 312 CpG island CpG island 9454
D17Mit169 17 69544118 to 69544268 150 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 169
Gm9319 17 69554230 to 69554761 531 + pseudogene predicted gene 9319
Gm9598 17 69570406 to 69571181 775 + pseudogene predicted gene 9598
Gm22967 17 69594539 to 69594777 238 - unclassified non-coding RNA gene predicted gene, 22967
Cpgi9455 17 69605277 to 69605446 169 CpG island CpG island 9455
Gm49895 17 69766903 to 69776012 9109 - lincRNA gene predicted gene, 49895
Tssr149186 17 69776007 to 69776013 6 - TSS region transcription start site region 149186
D17Mit240 17 69847592 to 69847699 107 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 240
D17Mit153 17 69858785 to 69858931 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 153
Gm36594 17 69894630 to 69924006 29376 - lincRNA gene predicted gene, 36594
Gm4561 17 69925327 to 69925831 504 - pseudogene predicted gene 4561
Cpgi9456 17 69968843 to 69970764 1921 CpG island CpG island 9456
Tssr145646 17 69969046 to 69969058 12 + TSS region transcription start site region 145646
Dlgap1 17 69969073 to 70821413 852340 + protein coding gene DLG associated protein 1
Tssr145647 17 69969075 to 69969086 11 + TSS region transcription start site region 145647
Tssr145648 17 69969106 to 69969125 19 + TSS region transcription start site region 145648
Tssr145649 17 69969191 to 69969202 11 + TSS region transcription start site region 145649
Tssr145650 17 69969217 to 69969234 17 + TSS region transcription start site region 145650
Tssr145651 17 69969317 to 69969326 9 + TSS region transcription start site region 145651
Tssr145652 17 69969331 to 69969343 12 + TSS region transcription start site region 145652
Tssr145653 17 69969361 to 69969378 17 + TSS region transcription start site region 145653
Tssr145654 17 69969387 to 69969440 53 + TSS region transcription start site region 145654
Tssr145655 17 69982412 to 69982414 2 + TSS region transcription start site region 145655
Gm6393 17 70392597 to 70393569 972 - pseudogene predicted gene 6393
Tssr149187 17 70393556 to 70393560 4 - TSS region transcription start site region 149187
Gm6399 17 70400134 to 70400774 640 + pseudogene predicted gene 6399
Cpgi9457 17 70515976 to 70516857 881 CpG island CpG island 9457
Tssr145656 17 70521656 to 70521698 42 + TSS region transcription start site region 145656
Tssr145657 17 70521712 to 70521738 26 + TSS region transcription start site region 145657
Tssr145658 17 70521759 to 70521768 9 + TSS region transcription start site region 145658
Tssr145659 17 70521965 to 70521972 7 + TSS region transcription start site region 145659
Tssr145660 17 70522083 to 70522144 61 + TSS region transcription start site region 145660
Tssr145661 17 70522149 to 70522169 20 + TSS region transcription start site region 145661
Tssr145662 17 70529154 to 70529162 8 + TSS region transcription start site region 145662
Tssr145663 17 70534575 to 70534585 10 + TSS region transcription start site region 145663
Tssr145664 17 70561739 to 70561750 11 + TSS region transcription start site region 145664
Gm46581 17 70584358 to 70590001 5643 - lncRNA gene predicted gene, 46581
Cpgi9458 17 70593194 to 70593354 160 CpG island CpG island 9458
Tssr145665 17 70657450 to 70657475 25 + TSS region transcription start site region 145665
Cpgi9459 17 70657528 to 70657873 345 CpG island CpG island 9459
Cpgi9460 17 70662410 to 70662899 489 CpG island CpG island 9460
Tssr145666 17 70662732 to 70662757 25 + TSS region transcription start site region 145666
Gm36746 17 70672806 to 70757443 84637 - lncRNA gene predicted gene, 36746
Tssr149188 17 70679896 to 70679913 17 - TSS region transcription start site region 149188
Tssr149189 17 70687497 to 70687499 2 - TSS region transcription start site region 149189
Tssr145667 17 70694459 to 70694463 4 + TSS region transcription start site region 145667
D17Mit160 17 70728913 to 70729038 125 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 160
Tssr149190 17 70740116 to 70740119 3 - TSS region transcription start site region 149190
5031415H12Rik 17 70745329 to 70755582 10253 - antisense lncRNA gene RIKEN cDNA 5031415H12 gene
Tssr149191 17 70746883 to 70746890 7 - TSS region transcription start site region 149191
Tssr145668 17 70747067 to 70747074 7 + TSS region transcription start site region 145668
Tssr145669 17 70747308 to 70747313 5 + TSS region transcription start site region 145669
Tssr149192 17 70747707 to 70747731 24 - TSS region transcription start site region 149192
Tssr145670 17 70748000 to 70748019 19 + TSS region transcription start site region 145670
Tssr145671 17 70748089 to 70748103 14 + TSS region transcription start site region 145671
Tssr145672 17 70748296 to 70748329 33 + TSS region transcription start site region 145672
Tssr145673 17 70751335 to 70751365 30 + TSS region transcription start site region 145673
Tssr145674 17 70751404 to 70751419 15 + TSS region transcription start site region 145674
Tssr149193 17 70753271 to 70753293 22 - TSS region transcription start site region 149193
Tssr149194 17 70753451 to 70753461 10 - TSS region transcription start site region 149194
Tssr149195 17 70753511 to 70753517 6 - TSS region transcription start site region 149195
Cpgi9461 17 70755030 to 70755221 191 CpG island CpG island 9461
Tssr149196 17 70755054 to 70755083 29 - TSS region transcription start site region 149196
Tssr149197 17 70755441 to 70755474 33 - TSS region transcription start site region 149197
Tssr145675 17 70756011 to 70756025 14 + TSS region transcription start site region 145675
Tssr145676 17 70756042 to 70756053 11 + TSS region transcription start site region 145676
Tssr145677 17 70756085 to 70756090 5 + TSS region transcription start site region 145677
Tssr149198 17 70761393 to 70761406 13 - TSS region transcription start site region 149198
Gm41609 17 70765839 to 70806059 40220 - lncRNA gene predicted gene, 41609
Cpgi9462 17 70766102 to 70766263 161 CpG island CpG island 9462
Tssr149199 17 70805985 to 70806005 20 - TSS region transcription start site region 149199
Cpgi9463 17 70817921 to 70818756 835 CpG island CpG island 9463
Tssr145678 17 70819672 to 70819682 10 + TSS region transcription start site region 145678
Tssr149200 17 70819782 to 70819786 4 - TSS region transcription start site region 149200
Tssr149201 17 70819897 to 70819907 10 - TSS region transcription start site region 149201
Cpgi9464 17 70823489 to 70823682 193 CpG island CpG island 9464
Tssr149202 17 70827718 to 70827740 22 - TSS region transcription start site region 149202
Tssr149203 17 70829959 to 70829969 10 - TSS region transcription start site region 149203
Tssr149204 17 70829981 to 70830011 30 - TSS region transcription start site region 149204
Tssr145679 17 70830190 to 70830219 29 + TSS region transcription start site region 145679
Tssr149205 17 70834491 to 70834502 11 - TSS region transcription start site region 149205
Tssr149206 17 70834528 to 70834553 25 - TSS region transcription start site region 149206
Cpgi9465 17 70834535 to 70834794 259 CpG island CpG island 9465
Tssr149207 17 70834561 to 70834573 12 - TSS region transcription start site region 149207
Tssr145680 17 70834620 to 70834674 54 + TSS region transcription start site region 145680
Gm20703 17 70834664 to 70836044 1380 + lincRNA gene predicted gene 20703
Tssr145681 17 70834742 to 70834749 7 + TSS region transcription start site region 145681
Tssr149208 17 70834801 to 70834827 26 - TSS region transcription start site region 149208
Tssr149209 17 70834830 to 70834855 25 - TSS region transcription start site region 149209
Tssr145682 17 70834942 to 70834957 15 + TSS region transcription start site region 145682
Gm41610 17 70838514 to 70842088 3574 - lncRNA gene predicted gene, 41610
Tssr149210 17 70840864 to 70840879 15 - TSS region transcription start site region 149210
Tssr149211 17 70840910 to 70840956 46 - TSS region transcription start site region 149211
Tssr149212 17 70842097 to 70842100 3 - TSS region transcription start site region 149212
Tssr149213 17 70842506 to 70842508 2 - TSS region transcription start site region 149213
Tgif1 17 70844205 to 70853532 9327 - protein coding gene TGFB-induced factor homeobox 1
Tssr149214 17 70844798 to 70844828 30 - TSS region transcription start site region 149214
Tssr149215 17 70845030 to 70845061 31 - TSS region transcription start site region 149215
Tssr149216 17 70845165 to 70845178 13 - TSS region transcription start site region 149216
Tssr149217 17 70846250 to 70846287 37 - TSS region transcription start site region 149217
Tssr149218 17 70846288 to 70846308 20 - TSS region transcription start site region 149218
Tssr145683 17 70846510 to 70846512 2 + TSS region transcription start site region 145683
Cpgi9466 17 70849158 to 70849899 741 CpG island CpG island 9466
Tssr149219 17 70849279 to 70849292 13 - TSS region transcription start site region 149219
Tssr145684 17 70849460 to 70849469 9 + TSS region transcription start site region 145684
Tssr149220 17 70849781 to 70849825 44 - TSS region transcription start site region 149220
Tssr145685 17 70850157 to 70850187 30 + TSS region transcription start site region 145685
Tssr149221 17 70850353 to 70850358 5 - TSS region transcription start site region 149221
Cpgi9467 17 70850492 to 70851957 1465 CpG island CpG island 9467
Tssr145686 17 70850695 to 70850720 25 + TSS region transcription start site region 145686
Tssr149222 17 70851057 to 70851068 11 - TSS region transcription start site region 149222
Tssr149223 17 70851075 to 70851087 12 - TSS region transcription start site region 149223
Tssr149224 17 70851109 to 70851118 9 - TSS region transcription start site region 149224
Tssr149225 17 70851189 to 70851216 27 - TSS region transcription start site region 149225
Tssr149226 17 70851218 to 70851232 14 - TSS region transcription start site region 149226
Tssr145687 17 70851336 to 70851364 28 + TSS region transcription start site region 145687
Tssr149227 17 70851627 to 70851643 16 - TSS region transcription start site region 149227
Tssr149228 17 70851710 to 70851738 28 - TSS region transcription start site region 149228
Tssr149229 17 70851756 to 70851774 18 - TSS region transcription start site region 149229
Tssr149230 17 70851886 to 70851893 7 - TSS region transcription start site region 149230
Tssr145688 17 70852015 to 70852023 8 + TSS region transcription start site region 145688
Tssr149231 17 70852232 to 70852261 29 - TSS region transcription start site region 149231
Tssr149232 17 70852275 to 70852284 9 - TSS region transcription start site region 149232
Tssr145689 17 70852405 to 70852431 26 + TSS region transcription start site region 145689
Cpgi9468 17 70852541 to 70853553 1012 CpG island CpG island 9468
Tssr145690 17 70852731 to 70852742 11 + TSS region transcription start site region 145690
Tssr145691 17 70852751 to 70852770 19 + TSS region transcription start site region 145691