Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:67987931-68387949

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Arhgap28	17	67842713 to 68004120	161407	-	protein coding gene	Rho GTPase activating protein 28
Tssr149179	17	67993086 to 67993095	9	-	TSS region	transcription start site region 149179
Tssr149180	17	67993177 to 67993193	16	-	TSS region	transcription start site region 149180
Cpgi9442	17	68003690 to 68004676	986		CpG island	CpG island 9442
Tssr5192	17	68004062 to 68004073	11	-	TSS region	transcription start site region 5192
Tssr149181	17	68004075 to 68004140	65	-	TSS region	transcription start site region 149181
Gm49944	17	68025818 to 68173556	147738	-	lincRNA gene	predicted gene, 49944
Gm49945	17	68113319 to 68114386	1067	-	lincRNA gene	predicted gene, 49945
D17Mit3	17	68143589 to 68143719	130		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 3
Gm36252	17	68182815 to 68187543	4728	-	lincRNA gene	predicted gene, 36252
Tssr145618	17	68187908 to 68187920	12	+	TSS region	transcription start site region 145618
Tssr145619	17	68187931 to 68187949	18	+	TSS region	transcription start site region 145619
Gm36312	17	68187979 to 68197421	9442	+	lncRNA gene	predicted gene, 36312
Cpgi9443	17	68273527 to 68274327	800		CpG island	CpG island 9443
L3mbtl4	17	68273797 to 68780086	506289	+	protein coding gene	L3MBTL4 histone methyl-lysine binding protein
Tssr5193	17	68314572 to 68314577	5	+	TSS region	transcription start site region 5193
Tssr145620	17	68314595 to 68314609	14	+	TSS region	transcription start site region 145620
Gm15974	17	68371280 to 68371810	530	-	pseudogene	predicted gene 15974