Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:67899147-69359369

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgap28 17 67842713 to 68004120 161407 - protein coding gene Rho GTPase activating protein 28
Tssr149172 17 67924514 to 67924519 5 - TSS region transcription start site region 149172
Tssr149173 17 67950908 to 67950983 75 - TSS region transcription start site region 149173
Tssr149174 17 67950984 to 67950996 12 - TSS region transcription start site region 149174
Tssr149175 17 67955707 to 67955721 14 - TSS region transcription start site region 149175
Tssr149176 17 67955940 to 67955952 12 - TSS region transcription start site region 149176
Tssr149177 17 67955997 to 67956008 11 - TSS region transcription start site region 149177
Tssr149178 17 67967073 to 67967075 2 - TSS region transcription start site region 149178
Tssr149179 17 67993086 to 67993095 9 - TSS region transcription start site region 149179
Tssr149180 17 67993177 to 67993193 16 - TSS region transcription start site region 149180
Cpgi9442 17 68003690 to 68004676 986 CpG island CpG island 9442
Tssr5192 17 68004062 to 68004073 11 - TSS region transcription start site region 5192
Tssr149181 17 68004075 to 68004140 65 - TSS region transcription start site region 149181
Gm49944 17 68025818 to 68173556 147738 - lincRNA gene predicted gene, 49944
Gm49945 17 68113319 to 68114386 1067 - lincRNA gene predicted gene, 49945
D17Mit3 17 68143589 to 68143719 130 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 3
Gm36252 17 68182815 to 68187543 4728 - lincRNA gene predicted gene, 36252
Tssr145618 17 68187908 to 68187920 12 + TSS region transcription start site region 145618
Tssr145619 17 68187931 to 68187949 18 + TSS region transcription start site region 145619
Gm36312 17 68187979 to 68197421 9442 + lncRNA gene predicted gene, 36312
Cpgi9443 17 68273527 to 68274327 800 CpG island CpG island 9443
L3mbtl4 17 68273797 to 68780086 506289 + protein coding gene L3MBTL4 histone methyl-lysine binding protein
Tssr5193 17 68314572 to 68314577 5 + TSS region transcription start site region 5193
Tssr145620 17 68314595 to 68314609 14 + TSS region transcription start site region 145620
Gm15974 17 68371280 to 68371810 530 - pseudogene predicted gene 15974
Tssr5194 17 68406201 to 68406202 1 + TSS region transcription start site region 5194
Bmch7 17 68451430 to 68451617 187 QTL bone mechanical trait 7
D17Mit185 17 68451430 to 68451617 187 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 185
Chlq9 17 68451430 to 68451617 187 QTL circulating hormone level QTL 9
D17Mit205 17 68629147 to 68629369 222 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 205
Gm17921 17 68698911 to 68700327 1416 + pseudogene predicted gene, 17921
Gm38593 17 68829835 to 68837155 7320 - antisense lncRNA gene predicted gene, 38593
Cpgi9444 17 68836719 to 68837860 1141 CpG island CpG island 9444
Tssr145621 17 68837062 to 68837093 31 + TSS region transcription start site region 145621
Tmem200c 17 68837136 to 68843138 6002 + protein coding gene transmembrane protein 200C
Cpgi9445 17 68840795 to 68842246 1451 CpG island CpG island 9445
Gm49949 17 68844025 to 68846527 2502 + unclassified gene predicted gene, 49949
Gm36392 17 68847558 to 68874356 26798 - lncRNA gene predicted gene, 36392
Cpgi9446 17 68851336 to 68851496 160 CpG island CpG island 9446
Tssr149182 17 68874248 to 68874252 4 - TSS region transcription start site region 149182
Gm36437 17 68980559 to 68987121 6562 - lncRNA gene predicted gene, 36437
Cpgi9447 17 69075519 to 69076896 1377 CpG island CpG island 9447
Tssr145622 17 69075672 to 69075691 19 + TSS region transcription start site region 145622
Epb41l3 17 69075683 to 69289989 214306 + protein coding gene erythrocyte membrane protein band 4.1 like 3
Tssr145623 17 69075699 to 69075745 46 + TSS region transcription start site region 145623
D17Mit271 17 69112086 to 69112214 128 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology-271
Tssr145624 17 69127399 to 69127409 10 + TSS region transcription start site region 145624
Tssr145625 17 69127414 to 69127445 31 + TSS region transcription start site region 145625
Tssr145626 17 69127450 to 69127462 12 + TSS region transcription start site region 145626
Tssr145627 17 69156506 to 69156514 8 + TSS region transcription start site region 145627
Cpgi9448 17 69156526 to 69157778 1252 CpG island CpG island 9448
Tssr145628 17 69156553 to 69156564 11 + TSS region transcription start site region 145628
Tssr145629 17 69156600 to 69156607 7 + TSS region transcription start site region 145629
Tssr145630 17 69156791 to 69156850 59 + TSS region transcription start site region 145630
Tssr145631 17 69156853 to 69156860 7 + TSS region transcription start site region 145631
Tssr145632 17 69159965 to 69159991 26 + TSS region transcription start site region 145632
Tssr145633 17 69159997 to 69160014 17 + TSS region transcription start site region 145633
Cpgi9449 17 69176764 to 69177194 430 CpG island CpG island 9449
Tssr145634 17 69262107 to 69262116 9 + TSS region transcription start site region 145634
Tssr145635 17 69262189 to 69262268 79 + TSS region transcription start site region 145635
Tssr145636 17 69262276 to 69262286 10 + TSS region transcription start site region 145636
Tssr149183 17 69274601 to 69274605 4 - TSS region transcription start site region 149183
2410021H03Rik 17 69275362 to 69277206 1844 - antisense lncRNA gene RIKEN cDNA 2410021H03 gene
Cpgi9450 17 69282735 to 69283339 604 CpG island CpG island 9450
Tssr145637 17 69289670 to 69289688 18 + TSS region transcription start site region 145637
Tssr145638 17 69289719 to 69289727 8 + TSS region transcription start site region 145638
Gm36487 17 69315994 to 69344713 28719 + lincRNA gene predicted gene, 36487