MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:6783095-6873139

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi8572	17	6782047 to 6783638	1591		CpG island	CpG island 8572
Tssr146335	17	6784444 to 6784458	14	-	TSS region	transcription start site region 146335
Tssr146336	17	6785440 to 6785461	21	-	TSS region	transcription start site region 146336
Gm41521	17	6788164 to 6792489	4325	-	lncRNA gene	predicted gene, 41521
Gm49717	17	6790793 to 6791495	702	+	pseudogene	predicted gene, 49717
Gm2885	17	6798383 to 6807124	8741	-	lincRNA gene	predicted gene 2885
4933426B08Rik	17	6808509 to 6818529	10020	+	lincRNA gene	RIKEN cDNA 4933426B08 gene
Tssr142480	17	6816586 to 6816606	20	+	TSS region	transcription start site region 142480
Tssr146337	17	6827270 to 6827282	12	-	TSS region	transcription start site region 146337
Cpgi8573	17	6827533 to 6828501	968		CpG island	CpG island 8573
Tssr146338	17	6827799 to 6827835	36	-	TSS region	transcription start site region 146338
Tssr146339	17	6827841 to 6827882	41	-	TSS region	transcription start site region 146339
Tssr4996	17	6827978 to 6827984	6	+	TSS region	transcription start site region 4996
Tssr146340	17	6827999 to 6828021	22	-	TSS region	transcription start site region 146340
Tssr142481	17	6828066 to 6828084	18	+	TSS region	transcription start site region 142481
Tssr142482	17	6828095 to 6828139	44	+	TSS region	transcription start site region 142482
Tssr142483	17	6828362 to 6828373	11	+	TSS region	transcription start site region 142483
Tssr142484	17	6828469 to 6828483	14	+	TSS region	transcription start site region 142484
Cpgi8574	17	6861573 to 6861998	425		CpG island	CpG island 8574