Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:67482815-68887543

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfibq28 17 66436200 to 67505241 1069041 QTL liver fibrosis QTL 28
D17Mit193 17 67499569 to 67499755 186 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 193
Tssr145611 17 67521161 to 67521167 6 + TSS region transcription start site region 145611
Gm22277 17 67551607 to 67551883 276 + unclassified non-coding RNA gene predicted gene, 22277
Gm36201 17 67559748 to 67629332 69584 - lincRNA gene predicted gene, 36201
D17Mit184 17 67566464 to 67566600 136 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 184
Tssr145612 17 67629612 to 67629622 10 + TSS region transcription start site region 145612
Lrrc30 17 67630965 to 67632723 1758 - protein coding gene leucine rich repeat containing 30
Tssr149165 17 67632484 to 67632527 43 - TSS region transcription start site region 149165
Tssr149166 17 67632640 to 67632664 24 - TSS region transcription start site region 149166
Tssr149167 17 67632671 to 67632689 18 - TSS region transcription start site region 149167
Tssr149168 17 67632707 to 67632728 21 - TSS region transcription start site region 149168
Tssr149169 17 67632730 to 67632748 18 - TSS region transcription start site region 149169
D17Mit71 17 67661467 to 67661572 105 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 71
Cpgi9440 17 67696862 to 67698088 1226 CpG island CpG island 9440
Tssr145613 17 67697227 to 67697246 19 + TSS region transcription start site region 145613
Tssr145614 17 67697253 to 67697276 23 + TSS region transcription start site region 145614
Lama1 17 67697259 to 67822647 125388 + protein coding gene laminin, alpha 1
Tssr145615 17 67722279 to 67722295 16 + TSS region transcription start site region 145615
Tssr145616 17 67722353 to 67722379 26 + TSS region transcription start site region 145616
Tssr145617 17 67728557 to 67728561 4 + TSS region transcription start site region 145617
Tssr149170 17 67842046 to 67842051 5 - TSS region transcription start site region 149170
Arhgap28 17 67842713 to 68004120 161407 - protein coding gene Rho GTPase activating protein 28
Gm17097 17 67850126 to 67851063 937 - pseudogene predicted gene 17097
Tssr149171 17 67868260 to 67868264 4 - TSS region transcription start site region 149171
Cpgi9441 17 67869723 to 67869975 252 CpG island CpG island 9441
Tssr149172 17 67924514 to 67924519 5 - TSS region transcription start site region 149172
Tssr149173 17 67950908 to 67950983 75 - TSS region transcription start site region 149173
Tssr149174 17 67950984 to 67950996 12 - TSS region transcription start site region 149174
Tssr149175 17 67955707 to 67955721 14 - TSS region transcription start site region 149175
Tssr149176 17 67955940 to 67955952 12 - TSS region transcription start site region 149176
Tssr149177 17 67955997 to 67956008 11 - TSS region transcription start site region 149177
Tssr149178 17 67967073 to 67967075 2 - TSS region transcription start site region 149178
Tssr149179 17 67993086 to 67993095 9 - TSS region transcription start site region 149179
Tssr149180 17 67993177 to 67993193 16 - TSS region transcription start site region 149180
Cpgi9442 17 68003690 to 68004676 986 CpG island CpG island 9442
Tssr5192 17 68004062 to 68004073 11 - TSS region transcription start site region 5192
Tssr149181 17 68004075 to 68004140 65 - TSS region transcription start site region 149181
Gm49944 17 68025818 to 68173556 147738 - lincRNA gene predicted gene, 49944
Gm49945 17 68113319 to 68114386 1067 - lincRNA gene predicted gene, 49945
D17Mit3 17 68143589 to 68143719 130 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 3
Gm36252 17 68182815 to 68187543 4728 - lincRNA gene predicted gene, 36252
Tssr145618 17 68187908 to 68187920 12 + TSS region transcription start site region 145618
Tssr145619 17 68187931 to 68187949 18 + TSS region transcription start site region 145619
Gm36312 17 68187979 to 68197421 9442 + lncRNA gene predicted gene, 36312
Cpgi9443 17 68273527 to 68274327 800 CpG island CpG island 9443
L3mbtl4 17 68273797 to 68780086 506289 + protein coding gene L3MBTL4 histone methyl-lysine binding protein
Tssr5193 17 68314572 to 68314577 5 + TSS region transcription start site region 5193
Tssr145620 17 68314595 to 68314609 14 + TSS region transcription start site region 145620
Gm15974 17 68371280 to 68371810 530 - pseudogene predicted gene 15974
Tssr5194 17 68406201 to 68406202 1 + TSS region transcription start site region 5194
D17Mit185 17 68451430 to 68451617 187 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 185
Bmch7 17 68451430 to 68451617 187 QTL bone mechanical trait 7
Chlq9 17 68451430 to 68451617 187 QTL circulating hormone level QTL 9
D17Mit205 17 68629147 to 68629369 222 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 205
Gm17921 17 68698911 to 68700327 1416 + pseudogene predicted gene, 17921
Gm38593 17 68829835 to 68837155 7320 - antisense lncRNA gene predicted gene, 38593
Cpgi9444 17 68836719 to 68837860 1141 CpG island CpG island 9444
Tssr145621 17 68837062 to 68837093 31 + TSS region transcription start site region 145621
Tmem200c 17 68837136 to 68843138 6002 + protein coding gene transmembrane protein 200C
Cpgi9445 17 68840795 to 68842246 1451 CpG island CpG island 9445
Gm49949 17 68844025 to 68846527 2502 + unclassified gene predicted gene, 49949
Gm36392 17 68847558 to 68874356 26798 - lncRNA gene predicted gene, 36392
Cpgi9446 17 68851336 to 68851496 160 CpG island CpG island 9446
Tssr149182 17 68874248 to 68874252 4 - TSS region transcription start site region 149182