Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:66641962-67152108

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptprm 17 66666947 to 67354457 687510 - protein coding gene protein tyrosine phosphatase, receptor type, M
Gm49941 17 66681738 to 66682194 456 - pseudogene predicted gene, 49941
Cpgi9436 17 66683301 to 66683475 174 CpG island CpG island 9436
Tssr149140 17 66694025 to 66694034 9 - TSS region transcription start site region 149140
Tssr149141 17 66694059 to 66694070 11 - TSS region transcription start site region 149141
1700016K05Rik 17 66714454 to 66720485 6031 + antisense lncRNA gene RIKEN cDNA 1700016K05 gene
Tssr145609 17 66714468 to 66714491 23 + TSS region transcription start site region 145609
Gm47471 17 66738754 to 66746047 7293 + antisense lncRNA gene predicted gene, 47471
Gm49939 17 66778881 to 66779133 252 + pseudogene predicted gene, 49939
Gm18961 17 66823120 to 66823780 660 + pseudogene predicted gene, 18961
Gm49943 17 66824490 to 66824628 138 - pseudogene predicted gene, 49943
Gm49940 17 66862240 to 66862626 386 + pseudogene predicted gene, 49940
Ahl3 17 66896962 to 66897108 146 QTL age related hearing loss 3
D17Mit119 17 66896962 to 66897108 146 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 119
Gm49942 17 66926825 to 66930199 3374 - unclassified gene predicted gene, 49942
Gm9984 17 67010485 to 67019394 8909 + antisense lncRNA gene predicted gene 9984
Tssr145610 17 67021054 to 67021061 7 + TSS region transcription start site region 145610
Mir5709 17 67026147 to 67026235 88 - miRNA gene microRNA 5709
Tssr149142 17 67047975 to 67048018 43 - TSS region transcription start site region 149142
Tssr149143 17 67061485 to 67061532 47 - TSS region transcription start site region 149143
Tssr149144 17 67095389 to 67095393 4 - TSS region transcription start site region 149144
Tssr149145 17 67120420 to 67120423 3 - TSS region transcription start site region 149145
Tssr149146 17 67125951 to 67125954 3 - TSS region transcription start site region 149146
Cpgi9437 17 67126367 to 67126598 231 CpG island CpG island 9437
Tssr149147 17 67143439 to 67143457 18 - TSS region transcription start site region 149147
Tssr149148 17 67143602 to 67143613 11 - TSS region transcription start site region 149148
Tssr149149 17 67143618 to 67143630 12 - TSS region transcription start site region 149149