Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:66504894-66745042

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rab12 17 66494512 to 66519729 25217 - protein coding gene RAB12, member RAS oncogene family
Tssr149134 17 66518049 to 66518053 4 - TSS region transcription start site region 149134
Cpgi9435 17 66518707 to 66520199 1492 CpG island CpG island 9435
Tssr145608 17 66518777 to 66518795 18 + TSS region transcription start site region 145608
Gm41608 17 66518861 to 66524531 5670 + lncRNA gene predicted gene, 41608
Tssr149135 17 66519666 to 66519727 61 - TSS region transcription start site region 149135
Tssr149136 17 66519734 to 66519746 12 - TSS region transcription start site region 149136
Gm49938 17 66532103 to 66541512 9409 + lincRNA gene predicted gene, 49938
9030409C19Rik 17 66549108 to 66551920 2812 unclassified gene RIKEN cDNA 9030409C19 gene
Themis3 17 66555252 to 66594622 39370 - protein coding gene thymocyte selection associated family member 3
Tssr149137 17 66594573 to 66594591 18 - TSS region transcription start site region 149137
Tssr149138 17 66594592 to 66594654 62 - TSS region transcription start site region 149138
Tssr149139 17 66595332 to 66595337 5 - TSS region transcription start site region 149139
Gm46576 17 66624894 to 66625042 148 - pseudogene predicted gene, 46576
Ptprm 17 66666947 to 67354457 687510 - protein coding gene protein tyrosine phosphatase, receptor type, M
Gm49941 17 66681738 to 66682194 456 - pseudogene predicted gene, 49941
Cpgi9436 17 66683301 to 66683475 174 CpG island CpG island 9436
Tssr149140 17 66694025 to 66694034 9 - TSS region transcription start site region 149140
Tssr149141 17 66694059 to 66694070 11 - TSS region transcription start site region 149141
1700016K05Rik 17 66714454 to 66720485 6031 + antisense lncRNA gene RIKEN cDNA 1700016K05 gene
Tssr145609 17 66714468 to 66714491 23 + TSS region transcription start site region 145609
Gm47471 17 66738754 to 66746047 7293 + antisense lncRNA gene predicted gene, 47471