MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:66499573-66689591

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rab12	17	66494512 to 66519729	25217	-	protein coding gene	RAB12, member RAS oncogene family
Tssr149133	17	66504208 to 66504217	9	-	TSS region	transcription start site region 149133
Tssr149134	17	66518049 to 66518053	4	-	TSS region	transcription start site region 149134
Cpgi9435	17	66518707 to 66520199	1492		CpG island	CpG island 9435
Tssr145608	17	66518777 to 66518795	18	+	TSS region	transcription start site region 145608
Gm41608	17	66518861 to 66524531	5670	+	lncRNA gene	predicted gene, 41608
Tssr149135	17	66519666 to 66519727	61	-	TSS region	transcription start site region 149135
Tssr149136	17	66519734 to 66519746	12	-	TSS region	transcription start site region 149136
Gm49938	17	66532103 to 66541512	9409	+	lincRNA gene	predicted gene, 49938
9030409C19Rik	17	66549108 to 66551920	2812		unclassified gene	RIKEN cDNA 9030409C19 gene
Themis3	17	66555252 to 66594622	39370	-	protein coding gene	thymocyte selection associated family member 3
Tssr149137	17	66594573 to 66594591	18	-	TSS region	transcription start site region 149137
Tssr149138	17	66594592 to 66594654	62	-	TSS region	transcription start site region 149138
Tssr149139	17	66595332 to 66595337	5	-	TSS region	transcription start site region 149139
Gm46576	17	66624894 to 66625042	148	-	pseudogene	predicted gene, 46576
Ptprm	17	66666947 to 67354457	687510	-	protein coding gene	protein tyrosine phosphatase, receptor type, M
Gm49941	17	66681738 to 66682194	456	-	pseudogene	predicted gene, 49941
Cpgi9436	17	66683301 to 66683475	174		CpG island	CpG island 9436