Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:66111901-66421929

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi9425 17 66111454 to 66111936 482 CpG island CpG island 9425
Washc1 17 66111546 to 66120503 8957 + protein coding gene WASH complex subunit 1
Cpgi9426 17 66123397 to 66124207 810 CpG island CpG island 9426
Ddx11 17 66123520 to 66152174 28654 + protein coding gene DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
Tssr145596 17 66123540 to 66123582 42 + TSS region transcription start site region 145596
Tssr145597 17 66123583 to 66123594 11 + TSS region transcription start site region 145597
Tssr145598 17 66123598 to 66123617 19 + TSS region transcription start site region 145598
Tssr149110 17 66187293 to 66187311 18 - TSS region transcription start site region 149110
Gm49930 17 66187658 to 66187991 333 - pseudogene predicted gene, 49930
Tssr149111 17 66188221 to 66188224 3 - TSS region transcription start site region 149111
Gm49931 17 66188258 to 66189698 1440 + pseudogene predicted gene, 49931
Gm20742 17 66193352 to 66199820 6468 + lincRNA gene predicted gene, 20742
Tssr149112 17 66206674 to 66206714 40 - TSS region transcription start site region 149112
Tssr145599 17 66206805 to 66206833 28 + TSS region transcription start site region 145599
Tssr5190 17 66211528 to 66211534 6 + TSS region transcription start site region 5190
Gm17891 17 66227249 to 66228027 778 - pseudogene predicted gene, 17891
Gm49932 17 66231949 to 66236369 4420 - lincRNA gene predicted gene, 49932
Tssr145600 17 66233547 to 66233571 24 + TSS region transcription start site region 145600
Cpgi9427 17 66234521 to 66234759 238 CpG island CpG island 9427
Tssr145601 17 66235746 to 66235753 7 + TSS region transcription start site region 145601
Tssr149113 17 66266901 to 66266929 28 - TSS region transcription start site region 149113
Gm49933 17 66319076 to 66319512 436 - pseudogene predicted gene, 49933
Tssr149114 17 66319531 to 66319547 16 - TSS region transcription start site region 149114
Tssr5191 17 66320487 to 66320500 13 + TSS region transcription start site region 5191
Mtcl1 17 66336982 to 66449750 112768 - protein coding gene microtubule crosslinking factor 1
Cpgi9428 17 66343009 to 66343700 691 CpG island CpG island 9428
Tssr149115 17 66345416 to 66345425 9 - TSS region transcription start site region 149115
Tssr149116 17 66346550 to 66346565 15 - TSS region transcription start site region 149116
C130090I23Rik 17 66348864 to 66352964 4100 unclassified gene RIKEN cDNA C130090I23 gene
Tssr149117 17 66349668 to 66349672 4 - TSS region transcription start site region 149117
Tssr149118 17 66357720 to 66357723 3 - TSS region transcription start site region 149118
Cpgi9429 17 66357931 to 66358206 275 CpG island CpG island 9429
Cpgi9430 17 66363927 to 66364759 832 CpG island CpG island 9430
Tssr145602 17 66364591 to 66364622 31 + TSS region transcription start site region 145602
Tssr149119 17 66378893 to 66378908 15 - TSS region transcription start site region 149119
Cpgi9431 17 66379389 to 66380134 745 CpG island CpG island 9431
Tssr149120 17 66413240 to 66413241 1 - TSS region transcription start site region 149120
Gm4705 17 66413631 to 66413984 353 - pseudogene predicted gene 4705
Cpgi9432 17 66417153 to 66417328 175 CpG island CpG island 9432
Tssr149121 17 66419698 to 66419699 1 - TSS region transcription start site region 149121