Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:65986548-66216559

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ankrd12 17 65965703 to 66077089 111386 - protein coding gene ankyrin repeat domain 12
Tssr149099 17 65986552 to 65986580 28 - TSS region transcription start site region 149099
Tssr149100 17 65986795 to 65986813 18 - TSS region transcription start site region 149100
Tssr149101 17 65986892 to 65986902 10 - TSS region transcription start site region 149101
Tssr145589 17 66005626 to 66005648 22 + TSS region transcription start site region 145589
Tssr145590 17 66005669 to 66005682 13 + TSS region transcription start site region 145590
Tssr145591 17 66005696 to 66005717 21 + TSS region transcription start site region 145591
Gm49925 17 66005705 to 66006087 382 + pseudogene predicted gene, 49925
Tssr145592 17 66005741 to 66005754 13 + TSS region transcription start site region 145592
Cpgi9422 17 66008504 to 66008687 183 CpG island CpG island 9422
Tssr149102 17 66042562 to 66042568 6 - TSS region transcription start site region 149102
Tssr149103 17 66051634 to 66051640 6 - TSS region transcription start site region 149103
Cpgi9423 17 66075968 to 66077716 1748 CpG island CpG island 9423
5430411C19Rik 17 66076199 to 66077967 1768 unclassified gene RIKEN cDNA 5430411C19 gene
Tssr149104 17 66076812 to 66076840 28 - TSS region transcription start site region 149104
Tssr149105 17 66077033 to 66077081 48 - TSS region transcription start site region 149105
Ndufv2 17 66078795 to 66101559 22764 - protein coding gene NADH:ubiquinone oxidoreductase core subunit V2
Gm23264 17 66086094 to 66086200 106 + snRNA gene predicted gene, 23264
Gm49927 17 66094933 to 66095170 237 + pseudogene predicted gene, 49927
Cpgi9424 17 66100854 to 66101943 1089 CpG island CpG island 9424
Tssr149106 17 66101466 to 66101534 68 - TSS region transcription start site region 149106
Tssr149107 17 66101548 to 66101559 11 - TSS region transcription start site region 149107
Tssr145593 17 66101699 to 66101714 15 + TSS region transcription start site region 145593
Tssr149108 17 66102007 to 66102018 11 - TSS region transcription start site region 149108
Cpgi9425 17 66111454 to 66111936 482 CpG island CpG island 9425
Tssr149109 17 66111516 to 66111524 8 - TSS region transcription start site region 149109
Tssr145594 17 66111529 to 66111581 52 + TSS region transcription start site region 145594
Washc1 17 66111546 to 66120503 8957 + protein coding gene WASH complex subunit 1
Tssr145595 17 66111605 to 66111665 60 + TSS region transcription start site region 145595
Cpgi9426 17 66123397 to 66124207 810 CpG island CpG island 9426
Ddx11 17 66123520 to 66152174 28654 + protein coding gene DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
Tssr145596 17 66123540 to 66123582 42 + TSS region transcription start site region 145596
Tssr145597 17 66123583 to 66123594 11 + TSS region transcription start site region 145597
Tssr145598 17 66123598 to 66123617 19 + TSS region transcription start site region 145598
Tssr149110 17 66187293 to 66187311 18 - TSS region transcription start site region 149110
Gm49930 17 66187658 to 66187991 333 - pseudogene predicted gene, 49930
Tssr149111 17 66188221 to 66188224 3 - TSS region transcription start site region 149111
Gm49931 17 66188258 to 66189698 1440 + pseudogene predicted gene, 49931
Gm20742 17 66193352 to 66199820 6468 + lincRNA gene predicted gene, 20742
Tssr149112 17 66206674 to 66206714 40 - TSS region transcription start site region 149112
Tssr145599 17 66206805 to 66206833 28 + TSS region transcription start site region 145599
Tssr5190 17 66211528 to 66211534 6 + TSS region transcription start site region 5190