Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:65804646-65894657

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ppp4r1 17 65782573 to 65841926 59353 + protein coding gene protein phosphatase 4, regulatory subunit 1
Tssr145583 17 65817055 to 65817061 6 + TSS region transcription start site region 145583
Ralbp1 17 65848415 to 65885755 37340 - protein coding gene ralA binding protein 1
Tssr149078 17 65849646 to 65849657 11 - TSS region transcription start site region 149078
Tssr149079 17 65864645 to 65864672 27 - TSS region transcription start site region 149079
Tssr149080 17 65864678 to 65864697 19 - TSS region transcription start site region 149080
Tssr149081 17 65864719 to 65864735 16 - TSS region transcription start site region 149081
Tssr149082 17 65867615 to 65867650 35 - TSS region transcription start site region 149082
Tssr149083 17 65868106 to 65868128 22 - TSS region transcription start site region 149083
4631402F24Rik 17 65871397 to 65872417 1020 unclassified gene RIKEN cDNA 4631402F24 gene
Cpgi9420 17 65884014 to 65885531 1517 CpG island CpG island 9420
Tssr149084 17 65884745 to 65884754 9 - TSS region transcription start site region 149084
Tssr149085 17 65884760 to 65884778 18 - TSS region transcription start site region 149085
Tssr149086 17 65884792 to 65884888 96 - TSS region transcription start site region 149086
Tssr149087 17 65884902 to 65884937 35 - TSS region transcription start site region 149087
Tssr149088 17 65884952 to 65884963 11 - TSS region transcription start site region 149088
Tssr145584 17 65885142 to 65885157 15 + TSS region transcription start site region 145584
Tssr149089 17 65885285 to 65885301 16 - TSS region transcription start site region 149089
Gm49870 17 65885633 to 65887027 1394 + bidirectional promoter lncRNA gene predicted gene, 49870
Tssr145585 17 65886352 to 65886394 42 + TSS region transcription start site region 145585
Gm49871 17 65886420 to 65889035 2615 + lincRNA gene predicted gene, 49871
Tssr145586 17 65886468 to 65886479 11 + TSS region transcription start site region 145586
D17Mit217.3 17 65887252 to 65887409 157 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 217.3
D17Mit217 17 65887410 to 65887530 120 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 217