Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:65569506-65879509

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vapa 17 65580053 to 65613939 33886 - protein coding gene vesicle-associated membrane protein, associated protein A
Tssr149050 17 65580639 to 65580652 13 - TSS region transcription start site region 149050
Tssr149051 17 65580696 to 65580708 12 - TSS region transcription start site region 149051
Tssr149052 17 65580832 to 65580844 12 - TSS region transcription start site region 149052
Tssr149053 17 65594931 to 65594991 60 - TSS region transcription start site region 149053
Cpgi9417 17 65612316 to 65614370 2054 CpG island CpG island 9417
Tssr149054 17 65613486 to 65613514 28 - TSS region transcription start site region 149054
Tssr149055 17 65613521 to 65613548 27 - TSS region transcription start site region 149055
Tssr149056 17 65613864 to 65613911 47 - TSS region transcription start site region 149056
Tssr149057 17 65613922 to 65613937 15 - TSS region transcription start site region 149057
Txndc2 17 65637507 to 65642168 4661 - protein coding gene thioredoxin domain containing 2 (spermatozoa)
Tssr149058 17 65638946 to 65638950 4 - TSS region transcription start site region 149058
Tssr149059 17 65639786 to 65639799 13 - TSS region transcription start site region 149059
Tssr149060 17 65639807 to 65639817 10 - TSS region transcription start site region 149060
Tssr149061 17 65639822 to 65639839 17 - TSS region transcription start site region 149061
Tssr5189 17 65642145 to 65642152 7 - TSS region transcription start site region 5189
Tssr149062 17 65642159 to 65642182 23 - TSS region transcription start site region 149062
Tssr149063 17 65642188 to 65642206 18 - TSS region transcription start site region 149063
Tssr149064 17 65642212 to 65642223 11 - TSS region transcription start site region 149064
Gm35477 17 65642319 to 65644492 2173 + lncRNA gene predicted gene, 35477
Tssr145570 17 65642321 to 65642328 7 + TSS region transcription start site region 145570
Tssr149065 17 65643937 to 65643967 30 - TSS region transcription start site region 149065
Rab31 17 65651729 to 65772752 121023 - protein coding gene RAB31, member RAS oncogene family
Tssr149066 17 65654103 to 65654109 6 - TSS region transcription start site region 149066
Tssr149067 17 65654309 to 65654325 16 - TSS region transcription start site region 149067
Gm49867 17 65661327 to 65661578 251 - pseudogene predicted gene, 49867
Tssr149068 17 65674429 to 65674432 3 - TSS region transcription start site region 149068
Tssr149069 17 65675041 to 65675051 10 - TSS region transcription start site region 149069
Tssr149070 17 65675064 to 65675076 12 - TSS region transcription start site region 149070
Tssr149071 17 65675088 to 65675093 5 - TSS region transcription start site region 149071
Tssr149072 17 65704781 to 65704794 13 - TSS region transcription start site region 149072
Tssr145571 17 65724506 to 65724509 3 + TSS region transcription start site region 145571
Tssr149073 17 65748483 to 65748489 6 - TSS region transcription start site region 149073
Cpgi9418 17 65771975 to 65772976 1001 CpG island CpG island 9418
Tssr149074 17 65772635 to 65772650 15 - TSS region transcription start site region 149074
Tssr149075 17 65772665 to 65772676 11 - TSS region transcription start site region 149075
Tssr149076 17 65772686 to 65772695 9 - TSS region transcription start site region 149076
Tssr149077 17 65777566 to 65777576 10 - TSS region transcription start site region 149077
Cpgi9419 17 65782379 to 65784087 1708 CpG island CpG island 9419
Ppp4r1 17 65782573 to 65841926 59353 + protein coding gene protein phosphatase 4, regulatory subunit 1
Tssr145572 17 65782701 to 65782726 25 + TSS region transcription start site region 145572
Tssr145573 17 65782984 to 65783104 120 + TSS region transcription start site region 145573
Tssr145574 17 65783106 to 65783177 71 + TSS region transcription start site region 145574
Tssr145575 17 65783348 to 65783403 55 + TSS region transcription start site region 145575
Tssr145576 17 65783406 to 65783468 62 + TSS region transcription start site region 145576
4930406M16Rik 17 65783769 to 65784265 496 unclassified gene RIKEN cDNA 4930406M16 gene
Tssr145577 17 65794165 to 65794211 46 + TSS region transcription start site region 145577
Tssr145578 17 65799211 to 65799215 4 + TSS region transcription start site region 145578
Tssr145579 17 65800029 to 65800032 3 + TSS region transcription start site region 145579
Tssr145580 17 65800036 to 65800046 10 + TSS region transcription start site region 145580
Tssr145581 17 65800049 to 65800058 9 + TSS region transcription start site region 145581
Tssr145582 17 65800063 to 65800075 12 + TSS region transcription start site region 145582
Tssr145583 17 65817055 to 65817061 6 + TSS region transcription start site region 145583
Ralbp1 17 65848415 to 65885755 37340 - protein coding gene ralA binding protein 1
Tssr149078 17 65849646 to 65849657 11 - TSS region transcription start site region 149078
Tssr149079 17 65864645 to 65864672 27 - TSS region transcription start site region 149079
Tssr149080 17 65864678 to 65864697 19 - TSS region transcription start site region 149080
Tssr149081 17 65864719 to 65864735 16 - TSS region transcription start site region 149081
Tssr149082 17 65867615 to 65867650 35 - TSS region transcription start site region 149082
Tssr149083 17 65868106 to 65868128 22 - TSS region transcription start site region 149083
4631402F24Rik 17 65871397 to 65872417 1020 unclassified gene RIKEN cDNA 4631402F24 gene