Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:65435994-65680038

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem232 17 65255999 to 65540782 284783 - protein coding gene transmembrane protein 232
Gm18736 17 65438128 to 65438697 569 - pseudogene predicted gene, 18736
Gm25731 17 65509368 to 65509492 124 + miRNA gene predicted gene, 25731
Tssr149045 17 65510024 to 65510043 19 - TSS region transcription start site region 149045
Tssr149046 17 65510048 to 65510051 3 - TSS region transcription start site region 149046
Tssr149047 17 65510054 to 65510084 30 - TSS region transcription start site region 149047
Gm18138 17 65513476 to 65513968 492 - pseudogene predicted gene, 18138
Tssr149048 17 65540747 to 65540773 26 - TSS region transcription start site region 149048
Tssr149049 17 65540785 to 65540792 7 - TSS region transcription start site region 149049
Gm35400 17 65555994 to 65560038 4044 - lncRNA gene predicted gene, 35400
Gm49866 17 65560385 to 65560776 391 - pseudogene predicted gene, 49866
D17Mit255 17 65567151 to 65567275 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 255
Vapa 17 65580053 to 65613939 33886 - protein coding gene vesicle-associated membrane protein, associated protein A
Tssr149050 17 65580639 to 65580652 13 - TSS region transcription start site region 149050
Tssr149051 17 65580696 to 65580708 12 - TSS region transcription start site region 149051
Tssr149052 17 65580832 to 65580844 12 - TSS region transcription start site region 149052
Tssr149053 17 65594931 to 65594991 60 - TSS region transcription start site region 149053
Cpgi9417 17 65612316 to 65614370 2054 CpG island CpG island 9417
Tssr149054 17 65613486 to 65613514 28 - TSS region transcription start site region 149054
Tssr149055 17 65613521 to 65613548 27 - TSS region transcription start site region 149055
Tssr149056 17 65613864 to 65613911 47 - TSS region transcription start site region 149056
Tssr149057 17 65613922 to 65613937 15 - TSS region transcription start site region 149057
Txndc2 17 65637507 to 65642168 4661 - protein coding gene thioredoxin domain containing 2 (spermatozoa)
Tssr149058 17 65638946 to 65638950 4 - TSS region transcription start site region 149058
Tssr149059 17 65639786 to 65639799 13 - TSS region transcription start site region 149059
Tssr149060 17 65639807 to 65639817 10 - TSS region transcription start site region 149060
Tssr149061 17 65639822 to 65639839 17 - TSS region transcription start site region 149061
Tssr5189 17 65642145 to 65642152 7 - TSS region transcription start site region 5189
Tssr149062 17 65642159 to 65642182 23 - TSS region transcription start site region 149062
Tssr149063 17 65642188 to 65642206 18 - TSS region transcription start site region 149063
Tssr149064 17 65642212 to 65642223 11 - TSS region transcription start site region 149064
Gm35477 17 65642319 to 65644492 2173 + lncRNA gene predicted gene, 35477
Tssr145570 17 65642321 to 65642328 7 + TSS region transcription start site region 145570
Tssr149065 17 65643937 to 65643967 30 - TSS region transcription start site region 149065
Rab31 17 65651729 to 65772752 121023 - protein coding gene RAB31, member RAS oncogene family
Tssr149066 17 65654103 to 65654109 6 - TSS region transcription start site region 149066
Tssr149067 17 65654309 to 65654325 16 - TSS region transcription start site region 149067
Gm49867 17 65661327 to 65661578 251 - pseudogene predicted gene, 49867
Tssr149068 17 65674429 to 65674432 3 - TSS region transcription start site region 149068
Tssr149069 17 65675041 to 65675051 10 - TSS region transcription start site region 149069
Tssr149070 17 65675064 to 65675076 12 - TSS region transcription start site region 149070
Tssr149071 17 65675088 to 65675093 5 - TSS region transcription start site region 149071