Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:64980471-65700606

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tfv1 17 4804477 to 65330362 60525885 QTL total food volume 1
D17Mit204 17 64984562 to 64984737 175 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 204
D17Mit110 17 65055530 to 65055666 136 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 110
Gm35228 17 65080364 to 65101392 21028 - lncRNA gene predicted gene, 35228
Gm49865 17 65168514 to 65169203 689 - pseudogene predicted gene, 49865
Gm18419 17 65248241 to 65249220 979 + pseudogene predicted gene, 18419
Tmem232 17 65255999 to 65540782 284783 - protein coding gene transmembrane protein 232
D17Mit91 17 65330251 to 65330362 111 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 91
D17Dcr21 17 65340471 to 65340606 135 DNA segment DNA Segment, Chr 17, Derry C. Roopenian 21
D17Mit152 17 65340484 to 65340609 125 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 152
Tssr149044 17 65366828 to 65366830 2 - TSS region transcription start site region 149044
Gm18992 17 65395738 to 65396290 552 - pseudogene predicted gene, 18992
Gm9288 17 65427478 to 65429044 1566 + pseudogene predicted gene 9288
Gm18736 17 65438128 to 65438697 569 - pseudogene predicted gene, 18736
Gm25731 17 65509368 to 65509492 124 + miRNA gene predicted gene, 25731
Tssr149045 17 65510024 to 65510043 19 - TSS region transcription start site region 149045
Tssr149046 17 65510048 to 65510051 3 - TSS region transcription start site region 149046
Tssr149047 17 65510054 to 65510084 30 - TSS region transcription start site region 149047
Gm18138 17 65513476 to 65513968 492 - pseudogene predicted gene, 18138
Tssr149048 17 65540747 to 65540773 26 - TSS region transcription start site region 149048
Tssr149049 17 65540785 to 65540792 7 - TSS region transcription start site region 149049
Gm35400 17 65555994 to 65560038 4044 - lncRNA gene predicted gene, 35400
Gm49866 17 65560385 to 65560776 391 - pseudogene predicted gene, 49866
D17Mit255 17 65567151 to 65567275 124 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 255
Vapa 17 65580053 to 65613939 33886 - protein coding gene vesicle-associated membrane protein, associated protein A
Tssr149050 17 65580639 to 65580652 13 - TSS region transcription start site region 149050
Tssr149051 17 65580696 to 65580708 12 - TSS region transcription start site region 149051
Tssr149052 17 65580832 to 65580844 12 - TSS region transcription start site region 149052
Tssr149053 17 65594931 to 65594991 60 - TSS region transcription start site region 149053
Cpgi9417 17 65612316 to 65614370 2054 CpG island CpG island 9417
Tssr149054 17 65613486 to 65613514 28 - TSS region transcription start site region 149054
Tssr149055 17 65613521 to 65613548 27 - TSS region transcription start site region 149055
Tssr149056 17 65613864 to 65613911 47 - TSS region transcription start site region 149056
Tssr149057 17 65613922 to 65613937 15 - TSS region transcription start site region 149057
Txndc2 17 65637507 to 65642168 4661 - protein coding gene thioredoxin domain containing 2 (spermatozoa)
Tssr149058 17 65638946 to 65638950 4 - TSS region transcription start site region 149058
Tssr149059 17 65639786 to 65639799 13 - TSS region transcription start site region 149059
Tssr149060 17 65639807 to 65639817 10 - TSS region transcription start site region 149060
Tssr149061 17 65639822 to 65639839 17 - TSS region transcription start site region 149061
Tssr5189 17 65642145 to 65642152 7 - TSS region transcription start site region 5189
Tssr149062 17 65642159 to 65642182 23 - TSS region transcription start site region 149062
Tssr149063 17 65642188 to 65642206 18 - TSS region transcription start site region 149063
Tssr149064 17 65642212 to 65642223 11 - TSS region transcription start site region 149064
Gm35477 17 65642319 to 65644492 2173 + lncRNA gene predicted gene, 35477
Tssr145570 17 65642321 to 65642328 7 + TSS region transcription start site region 145570
Tssr149065 17 65643937 to 65643967 30 - TSS region transcription start site region 149065
Rab31 17 65651729 to 65772752 121023 - protein coding gene RAB31, member RAS oncogene family
Tssr149066 17 65654103 to 65654109 6 - TSS region transcription start site region 149066
Tssr149067 17 65654309 to 65654325 16 - TSS region transcription start site region 149067
Gm49867 17 65661327 to 65661578 251 - pseudogene predicted gene, 49867
Tssr149068 17 65674429 to 65674432 3 - TSS region transcription start site region 149068
Tssr149069 17 65675041 to 65675051 10 - TSS region transcription start site region 149069
Tssr149070 17 65675064 to 65675076 12 - TSS region transcription start site region 149070
Tssr149071 17 65675088 to 65675093 5 - TSS region transcription start site region 149071