MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:64157406-64507417

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rpl36-ps6	17	64192722 to 64192999	277	+	pseudogene	ribosomal protein L36, pseudogene 6
Cpgi9414	17	64212247 to 64212486	239		CpG island	CpG island 9414
4930435F05Rik	17	64265071 to 64269692	4621	-	lncRNA gene	RIKEN cDNA 4930435F05 gene
Gm34858	17	64267675 to 64276669	8994	+	lncRNA gene	predicted gene, 34858
Tssr149037	17	64269695 to 64269713	18	-	TSS region	transcription start site region 149037
Tssr145550	17	64269856 to 64269872	16	+	TSS region	transcription start site region 145550
Pja2	17	64281006 to 64331883	50877	-	protein coding gene	praja ring finger ubiquitin ligase 2
D17Ium1	17	64284941 to 64285167	226		DNA segment	DNA segment, Chr 17, Indiana University Medical 1
Tssr149038	17	64290045 to 64290047	2	-	TSS region	transcription start site region 149038
Tssr149039	17	64309307 to 64309320	13	-	TSS region	transcription start site region 149039
Tssr149040	17	64311299 to 64311328	29	-	TSS region	transcription start site region 149040
Gm24194	17	64321526 to 64321615	89	-	miRNA gene	predicted gene, 24194
Cpgi9415	17	64331272 to 64332562	1290		CpG island	CpG island 9415
Tssr149041	17	64331817 to 64331957	140	-	TSS region	transcription start site region 149041
Tssr149042	17	64331965 to 64331977	12	-	TSS region	transcription start site region 149042
Tssr145551	17	64332406 to 64332417	11	+	TSS region	transcription start site region 145551
Mir6420	17	64440806 to 64440907	101	+	miRNA gene	microRNA 6420
D17Mit118	17	64481051 to 64481250	199		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 118