Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:64079941-64490167

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fer 17 63863062 to 64139496 276434 + protein coding gene fer (fms/fps related) protein kinase
Tssr5188 17 64100435 to 64100463 28 + TSS region transcription start site region 5188
Gm46590 17 64122052 to 64133429 11377 - lncRNA gene predicted gene, 46590
Rpl36-ps6 17 64192722 to 64192999 277 + pseudogene ribosomal protein L36, pseudogene 6
Cpgi9414 17 64212247 to 64212486 239 CpG island CpG island 9414
4930435F05Rik 17 64265071 to 64269692 4621 - lncRNA gene RIKEN cDNA 4930435F05 gene
Gm34858 17 64267675 to 64276669 8994 + lncRNA gene predicted gene, 34858
Tssr149037 17 64269695 to 64269713 18 - TSS region transcription start site region 149037
Tssr145550 17 64269856 to 64269872 16 + TSS region transcription start site region 145550
Pja2 17 64281006 to 64331883 50877 - protein coding gene praja ring finger ubiquitin ligase 2
D17Ium1 17 64284941 to 64285167 226 DNA segment DNA segment, Chr 17, Indiana University Medical 1
Tssr149038 17 64290045 to 64290047 2 - TSS region transcription start site region 149038
Tssr149039 17 64309307 to 64309320 13 - TSS region transcription start site region 149039
Tssr149040 17 64311299 to 64311328 29 - TSS region transcription start site region 149040
Gm24194 17 64321526 to 64321615 89 - miRNA gene predicted gene, 24194
Cpgi9415 17 64331272 to 64332562 1290 CpG island CpG island 9415
Tssr149041 17 64331817 to 64331957 140 - TSS region transcription start site region 149041
Tssr149042 17 64331965 to 64331977 12 - TSS region transcription start site region 149042
Tssr145551 17 64332406 to 64332417 11 + TSS region transcription start site region 145551
Mir6420 17 64440806 to 64440907 101 + miRNA gene microRNA 6420
D17Mit118 17 64481051 to 64481250 199 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 118