Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:6301528-6742546

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem181a 17 6256862 to 6308314 51452 + protein coding gene transmembrane protein 181A
Dynlt1a 17 6306344 to 6317474 11130 - protein coding gene dynein light chain Tctex-type 1A
Tssr4992 17 6307993 to 6307996 3 + TSS region transcription start site region 4992
Gm26848 17 6314199 to 6493180 178981 + lincRNA gene predicted gene, 26848
Cpgi8571 17 6316777 to 6317051 274 CpG island CpG island 8571
Tssr146317 17 6317417 to 6317441 24 - TSS region transcription start site region 146317
Tssr146318 17 6317482 to 6317517 35 - TSS region transcription start site region 146318
Ppp1r2-ps1 17 6324025 to 6324642 617 - pseudogene protein phosphatase 1, regulatory inhibitor subunit 2, pseudogene 1
Gm2792 17 6339404 to 6358796 19392 - pseudogene predicted gene 2792
Gm49693 17 6354689 to 6355526 837 - pseudogene predicted gene, 49693
Gm29719 17 6369098 to 6427100 58002 - unclassified non-coding RNA gene predicted gene, 29719
Dynlt1b 17 6430112 to 6436296 6184 + protein coding gene dynein light chain Tctex-type 1B
Tssr142473 17 6430167 to 6430204 37 + TSS region transcription start site region 142473
Tmem181b-ps 17 6439002 to 6450994 11992 - pseudogene transmembrane protein 181B, pseudogene
Ppp1r2-ps5 17 6492191 to 6494321 2130 - pseudogene protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 5
Gm2808 17 6511791 to 6528713 16922 - protein coding gene predicted gene 2808
Gm17880 17 6521528 to 6522546 1018 - pseudogene predicted gene, 17880
Gm29721 17 6535892 to 6582703 46811 - protein coding gene predicted gene, 29721
Dynlt1c 17 6601779 to 6607891 6112 + protein coding gene dynein light chain Tctex-type 1C
Tmem181c-ps 17 6610103 to 6620925 10822 - pseudogene transmembrane protein 181C, pseudogene
Dynlt1f 17 6646602 to 6655900 9298 - protein coding gene dynein light chain Tctex-type 1F
Tssr4993 17 6659053 to 6659083 30 + TSS region transcription start site region 4993
Sytl3 17 6659093 to 6738044 78951 + protein coding gene synaptotagmin-like 3
Tssr142474 17 6659181 to 6659186 5 + TSS region transcription start site region 142474
Gm36309 17 6716001 to 6728327 12326 - lncRNA gene predicted gene, 36309
Tssr142475 17 6730223 to 6730261 38 + TSS region transcription start site region 142475
Ezr 17 6738131 to 6782780 44649 - protein coding gene ezrin
Tssr146319 17 6739803 to 6739830 27 - TSS region transcription start site region 146319
Tssr4994 17 6741235 to 6741257 22 - TSS region transcription start site region 4994
Tssr142476 17 6742352 to 6742376 24 + TSS region transcription start site region 142476