Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:62845837-63219203

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Efna5 17 62604184 to 62881317 277133 - protein coding gene ephrin A5
6430537K16Rik 17 62844253 to 62849408 5155 unclassified gene RIKEN cDNA 6430537K16 gene
Tssr149000 17 62855903 to 62855907 4 - TSS region transcription start site region 149000
C530014P21Rik 17 62858262 to 62863238 4976 unclassified gene RIKEN cDNA C530014P21 gene
Tssr149001 17 62858364 to 62858380 16 - TSS region transcription start site region 149001
Tssr149002 17 62870144 to 62870146 2 - TSS region transcription start site region 149002
Cpgi9409 17 62879666 to 62884377 4711 CpG island CpG island 9409
Tssr149003 17 62880870 to 62880885 15 - TSS region transcription start site region 149003
Tssr149004 17 62881252 to 62881353 101 - TSS region transcription start site region 149004
Tssr149005 17 62881392 to 62881458 66 - TSS region transcription start site region 149005
Tssr149006 17 62881677 to 62881729 52 - TSS region transcription start site region 149006
Tssr149007 17 62882101 to 62882173 72 - TSS region transcription start site region 149007
Tssr149008 17 62882426 to 62882460 34 - TSS region transcription start site region 149008
Tssr149009 17 62882663 to 62882692 29 - TSS region transcription start site region 149009
Tssr149010 17 62882711 to 62882723 12 - TSS region transcription start site region 149010
Tssr149011 17 62882842 to 62882895 53 - TSS region transcription start site region 149011
Tssr149012 17 62882983 to 62883036 53 - TSS region transcription start site region 149012
Tssr145535 17 62883393 to 62883399 6 + TSS region transcription start site region 145535
Gm34179 17 62938862 to 62939413 551 - lncRNA gene predicted gene, 34179
Tssr145536 17 62941048 to 62941056 8 + TSS region transcription start site region 145536
D17Mit253 17 62941706 to 62941936 230 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 253
Gm34230 17 63025837 to 63039203 13366 + lncRNA gene predicted gene, 34230
Gm34324 17 63041384 to 63046049 4665 + lncRNA gene predicted gene, 34324
Tssr145537 17 63044786 to 63044787 1 + TSS region transcription start site region 145537
Fbxl17 17 63057452 to 63500017 442565 - protein coding gene F-box and leucine-rich repeat protein 17
Gm25348 17 63096890 to 63097000 110 - rRNA gene predicted gene, 25348
Tssr149013 17 63141168 to 63141172 4 - TSS region transcription start site region 149013
Gm24730 17 63202738 to 63202854 116 + snoRNA gene predicted gene, 24730
Tssr149014 17 63216948 to 63216952 4 - TSS region transcription start site region 149014