Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:62809786-63279787

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Efna5 17 62604184 to 62881317 277133 - protein coding gene ephrin A5
Tssr148998 17 62815104 to 62815112 8 - TSS region transcription start site region 148998
Tssr148999 17 62816080 to 62816088 8 - TSS region transcription start site region 148999
Cpgi9408 17 62822940 to 62823170 230 CpG island CpG island 9408
3110005L21Rik 17 62838474 to 62840047 1573 unclassified gene RIKEN cDNA 3110005L21 gene
6430537K16Rik 17 62844253 to 62849408 5155 unclassified gene RIKEN cDNA 6430537K16 gene
Tssr149000 17 62855903 to 62855907 4 - TSS region transcription start site region 149000
C530014P21Rik 17 62858262 to 62863238 4976 unclassified gene RIKEN cDNA C530014P21 gene
Tssr149001 17 62858364 to 62858380 16 - TSS region transcription start site region 149001
Tssr149002 17 62870144 to 62870146 2 - TSS region transcription start site region 149002
Cpgi9409 17 62879666 to 62884377 4711 CpG island CpG island 9409
Tssr149003 17 62880870 to 62880885 15 - TSS region transcription start site region 149003
Tssr149004 17 62881252 to 62881353 101 - TSS region transcription start site region 149004
Tssr149005 17 62881392 to 62881458 66 - TSS region transcription start site region 149005
Tssr149006 17 62881677 to 62881729 52 - TSS region transcription start site region 149006
Tssr149007 17 62882101 to 62882173 72 - TSS region transcription start site region 149007
Tssr149008 17 62882426 to 62882460 34 - TSS region transcription start site region 149008
Tssr149009 17 62882663 to 62882692 29 - TSS region transcription start site region 149009
Tssr149010 17 62882711 to 62882723 12 - TSS region transcription start site region 149010
Tssr149011 17 62882842 to 62882895 53 - TSS region transcription start site region 149011
Tssr149012 17 62882983 to 62883036 53 - TSS region transcription start site region 149012
Tssr145535 17 62883393 to 62883399 6 + TSS region transcription start site region 145535
Gm34179 17 62938862 to 62939413 551 - lncRNA gene predicted gene, 34179
Tssr145536 17 62941048 to 62941056 8 + TSS region transcription start site region 145536
D17Mit253 17 62941706 to 62941936 230 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 253
Gm34230 17 63025837 to 63039203 13366 + lncRNA gene predicted gene, 34230
Gm34324 17 63041384 to 63046049 4665 + lncRNA gene predicted gene, 34324
Tssr145537 17 63044786 to 63044787 1 + TSS region transcription start site region 145537
Fbxl17 17 63057452 to 63500017 442565 - protein coding gene F-box and leucine-rich repeat protein 17
Gm25348 17 63096890 to 63097000 110 - rRNA gene predicted gene, 25348
Tssr149013 17 63141168 to 63141172 4 - TSS region transcription start site region 149013
Gm24730 17 63202738 to 63202854 116 + snoRNA gene predicted gene, 24730
Tssr149014 17 63216948 to 63216952 4 - TSS region transcription start site region 149014
Tssr149015 17 63265051 to 63265054 3 - TSS region transcription start site region 149015
Gm41607 17 63271339 to 63286375 15036 - lncRNA gene predicted gene, 41607