Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:62593716-62873720

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Efna5 17 62604184 to 62881317 277133 - protein coding gene ephrin A5
Tssr148986 17 62604956 to 62604958 2 - TSS region transcription start site region 148986
Tssr148987 17 62606679 to 62606682 3 - TSS region transcription start site region 148987
Tssr148988 17 62609954 to 62609960 6 - TSS region transcription start site region 148988
Tssr148989 17 62627930 to 62627935 5 - TSS region transcription start site region 148989
Tssr148990 17 62649683 to 62649688 5 - TSS region transcription start site region 148990
BC016608 17 62685589 to 62686988 1399 unclassified gene cDNA sequence BC016608
3222402N08Rik 17 62726952 to 62730291 3339 unclassified gene RIKEN cDNA 3222402N08 gene
Tssr148991 17 62733716 to 62733720 4 - TSS region transcription start site region 148991
Tssr148992 17 62734076 to 62734080 4 - TSS region transcription start site region 148992
D17Mit183 17 62740500 to 62740733 233 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 183
Tssr148993 17 62761139 to 62761144 5 - TSS region transcription start site region 148993
Tssr148994 17 62770897 to 62770903 6 - TSS region transcription start site region 148994
Tssr5187 17 62780079 to 62780122 43 - TSS region transcription start site region 5187
Tssr148995 17 62780323 to 62780346 23 - TSS region transcription start site region 148995
Tssr148996 17 62784058 to 62784063 5 - TSS region transcription start site region 148996
Gm46583 17 62786113 to 62790633 4520 - lncRNA gene predicted gene, 46583
Tssr148997 17 62803202 to 62803203 1 - TSS region transcription start site region 148997
Tssr148998 17 62815104 to 62815112 8 - TSS region transcription start site region 148998
Tssr148999 17 62816080 to 62816088 8 - TSS region transcription start site region 148999
Cpgi9408 17 62822940 to 62823170 230 CpG island CpG island 9408
3110005L21Rik 17 62838474 to 62840047 1573 unclassified gene RIKEN cDNA 3110005L21 gene
6430537K16Rik 17 62844253 to 62849408 5155 unclassified gene RIKEN cDNA 6430537K16 gene
Tssr149000 17 62855903 to 62855907 4 - TSS region transcription start site region 149000
C530014P21Rik 17 62858262 to 62863238 4976 unclassified gene RIKEN cDNA C530014P21 gene
Tssr149001 17 62858364 to 62858380 16 - TSS region transcription start site region 149001
Tssr149002 17 62870144 to 62870146 2 - TSS region transcription start site region 149002