Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:5891346-5991413

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Snx9	17	5841380 to 5931956	90576	+	protein coding gene	sorting nexin 9
Tssr142444	17	5898101 to 5898105	4	+	TSS region	transcription start site region 142444
Tssr142445	17	5926927 to 5926963	36	+	TSS region	transcription start site region 142445
Gm46599	17	5928306 to 5929351	1045	+	lncRNA gene	predicted gene, 46599
Cpgi8564	17	5934778 to 5935199	421		CpG island	CpG island 8564
D17Mit196	17	5936872 to 5936967	95		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 196
Gm8376	17	5939085 to 5939646	561	+	pseudogene	predicted gene 8376
Cpgi8565	17	5940546 to 5942084	1538		CpG island	CpG island 8565
Synj2	17	5941280 to 6044290	103010	+	protein coding gene	synaptojanin 2
Tssr142446	17	5941346 to 5941413	67	+	TSS region	transcription start site region 142446
Cpgi8566	17	5949296 to 5949745	449		CpG island	CpG island 8566
Tssr142447	17	5975705 to 5975732	27	+	TSS region	transcription start site region 142447
Tssr142448	17	5975747 to 5975759	12	+	TSS region	transcription start site region 142448
Tssr142449	17	5975802 to 5975830	28	+	TSS region	transcription start site region 142449
Tssr142450	17	5975967 to 5975986	19	+	TSS region	transcription start site region 142450
Gm35525	17	5982759 to 5989008	6249	-	lncRNA gene	predicted gene, 35525
Tssr146309	17	5988191 to 5988201	10	-	TSS region	transcription start site region 146309