Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 17:58900107-59113367

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16 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdzph1 17 58878808 to 58991375 112567 - protein coding gene PDZ and pleckstrin homology domains 1
Tssr148979 17 58908539 to 58908549 10 - TSS region transcription start site region 148979
Tssr148980 17 58932526 to 58932539 13 - TSS region transcription start site region 148980
Tssr148981 17 58934612 to 58934620 8 - TSS region transcription start site region 148981
Gm33751 17 58943937 to 58952582 8645 + lncRNA gene predicted gene, 33751
D17Mit150 17 58953961 to 58954073 112 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 150
Tssr148982 17 58991343 to 58991354 11 - TSS region transcription start site region 148982
Tssr148983 17 58991390 to 58991395 5 - TSS region transcription start site region 148983
Tssr145530 17 58996243 to 58996278 35 + TSS region transcription start site region 145530
Nudt12os 17 58996251 to 59024981 28730 + antisense lncRNA gene nudix (nucleoside diphosphate linked moiety X)-type motif 12, opposite strand
Nudt12 17 59000107 to 59013367 13260 - protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 12
Cpgi9407 17 59012930 to 59013358 428 CpG island CpG island 9407
Tssr148984 17 59013264 to 59013343 79 - TSS region transcription start site region 148984
Tssr5186 17 59040824 to 59040825 1 - TSS region transcription start site region 5186
n-TVcac3 17 59068708 to 59068780 72 + tRNA gene nuclear encoded tRNA valine 3 (anticodon CAC)
Tssr145531 17 59071376 to 59071378 2 + TSS region transcription start site region 145531