Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:5880546-6002084

Filter by:
19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Snx9 17 5841380 to 5931956 90576 + protein coding gene sorting nexin 9
Cpgi8563 17 5887004 to 5887161 157 CpG island CpG island 8563
Tssr142444 17 5898101 to 5898105 4 + TSS region transcription start site region 142444
Tssr142445 17 5926927 to 5926963 36 + TSS region transcription start site region 142445
Gm46599 17 5928306 to 5929351 1045 + lncRNA gene predicted gene, 46599
Cpgi8564 17 5934778 to 5935199 421 CpG island CpG island 8564
D17Mit196 17 5936872 to 5936967 95 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 196
Gm8376 17 5939085 to 5939646 561 + pseudogene predicted gene 8376
Cpgi8565 17 5940546 to 5942084 1538 CpG island CpG island 8565
Synj2 17 5941280 to 6044290 103010 + protein coding gene synaptojanin 2
Tssr142446 17 5941346 to 5941413 67 + TSS region transcription start site region 142446
Cpgi8566 17 5949296 to 5949745 449 CpG island CpG island 8566
Tssr142447 17 5975705 to 5975732 27 + TSS region transcription start site region 142447
Tssr142448 17 5975747 to 5975759 12 + TSS region transcription start site region 142448
Tssr142449 17 5975802 to 5975830 28 + TSS region transcription start site region 142449
Tssr142450 17 5975967 to 5975986 19 + TSS region transcription start site region 142450
Gm35525 17 5982759 to 5989008 6249 - lncRNA gene predicted gene, 35525
Tssr146309 17 5988191 to 5988201 10 - TSS region transcription start site region 146309
Tssr142451 17 5996838 to 5996864 26 + TSS region transcription start site region 142451