Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:57478848-58728982

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adgre1 17 57358691 to 57483527 124836 + protein coding gene adhesion G protein-coupled receptor E1
Tssr145526 17 57478896 to 57478914 18 + TSS region transcription start site region 145526
Tssr148978 17 57483521 to 57483525 4 - TSS region transcription start site region 148978
Tssr145527 17 57483854 to 57483859 5 + TSS region transcription start site region 145527
Tssr145528 17 57484717 to 57484729 12 + TSS region transcription start site region 145528
Vmn2r120 17 57508783 to 57545314 36531 - protein coding gene vomeronasal 2, receptor 120
Gm49842 17 57557266 to 57557965 699 - pseudogene predicted gene, 49842
Gm21834 17 57741767 to 57742219 452 - protein coding gene predicted gene, 21834
Gm18139 17 57741799 to 57743071 1272 + pseudogene predicted gene, 18139
Gm25102 17 57747565 to 57747676 111 + snRNA gene predicted gene, 25102
Gm17920 17 57756166 to 57757022 856 + pseudogene predicted gene, 17920
Tssr145529 17 57769164 to 57769217 53 + TSS region transcription start site region 145529
Cntnap5c 17 57769570 to 58410355 640785 + protein coding gene contactin associated protein-like 5C
Rpl7a-ps5 17 57838430 to 57839221 791 - pseudogene ribosomal protein L7A, pseudogene 5
Tssr5185 17 57839243 to 57839244 1 - TSS region transcription start site region 5185
D17Mit109 17 58103848 to 58103982 134 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 109
Gm49848 17 58462325 to 58462516 191 + pseudogene predicted gene, 49848
Cpgi9406 17 58567793 to 58568017 224 CpG island CpG island 9406
Gm6149 17 58579030 to 58579967 937 - pseudogene predicted gene 6149
Gm49849 17 58583092 to 58583635 543 + pseudogene predicted gene, 49849
Gm5815 17 58593614 to 58594840 1226 + pseudogene predicted pseudogene 5815
A330072L02Rik 17 58680347 to 58836041 155694 - lincRNA gene RIKEN cDNA A330072L02 gene