Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:57221716-57341732

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lfnq5 17 51431951 to 57227623 5795672 QTL lung function QTL 5
C3 17 57203970 to 57228136 24166 - protein coding gene complement component 3
Tssr148939 17 57221915 to 57221929 14 - TSS region transcription start site region 148939
Tssr145377 17 57222190 to 57222231 41 + TSS region transcription start site region 145377
Tssr148940 17 57222250 to 57222273 23 - TSS region transcription start site region 148940
Tssr148941 17 57222330 to 57222346 16 - TSS region transcription start site region 148941
Tssr148942 17 57222831 to 57222846 15 - TSS region transcription start site region 148942
Tssr148943 17 57222871 to 57222886 15 - TSS region transcription start site region 148943
Tssr148944 17 57222891 to 57222900 9 - TSS region transcription start site region 148944
Tssr148945 17 57222919 to 57222937 18 - TSS region transcription start site region 148945
Tssr148946 17 57222944 to 57222949 5 - TSS region transcription start site region 148946
Tssr145378 17 57223112 to 57223135 23 + TSS region transcription start site region 145378
Tssr148947 17 57223183 to 57223199 16 - TSS region transcription start site region 148947
Tssr145379 17 57223193 to 57223210 17 + TSS region transcription start site region 145379
Tssr145380 17 57223222 to 57223255 33 + TSS region transcription start site region 145380
Tssr148948 17 57223235 to 57223283 48 - TSS region transcription start site region 148948
Tssr145381 17 57223288 to 57223309 21 + TSS region transcription start site region 145381
Tssr148949 17 57223290 to 57223339 49 - TSS region transcription start site region 148949
Tssr145382 17 57223818 to 57223863 45 + TSS region transcription start site region 145382
Tssr148950 17 57223855 to 57223893 38 - TSS region transcription start site region 148950
Tssr148951 17 57223896 to 57223922 26 - TSS region transcription start site region 148951
Tssr145383 17 57223934 to 57223940 6 + TSS region transcription start site region 145383
Tssr148952 17 57223937 to 57223982 45 - TSS region transcription start site region 148952
Tssr145384 17 57224067 to 57224110 43 + TSS region transcription start site region 145384
Tssr148953 17 57224121 to 57224163 42 - TSS region transcription start site region 148953
Tssr148954 17 57224172 to 57224188 16 - TSS region transcription start site region 148954
Tssr148955 17 57224319 to 57224333 14 - TSS region transcription start site region 148955
Cpgi9399 17 57224322 to 57224815 493 CpG island CpG island 9399
Tssr148956 17 57224352 to 57224366 14 - TSS region transcription start site region 148956
Tssr148957 17 57224880 to 57224952 72 - TSS region transcription start site region 148957
Tssr148958 17 57225103 to 57225115 12 - TSS region transcription start site region 148958
Tssr145385 17 57225249 to 57225282 33 + TSS region transcription start site region 145385
Tssr148959 17 57225263 to 57225321 58 - TSS region transcription start site region 148959
Tssr148960 17 57226017 to 57226034 17 - TSS region transcription start site region 148960
Tssr145386 17 57226025 to 57226044 19 + TSS region transcription start site region 145386
Tssr148961 17 57226054 to 57226076 22 - TSS region transcription start site region 148961
Tssr148962 17 57226200 to 57226225 25 - TSS region transcription start site region 148962
Tssr148963 17 57226252 to 57226263 11 - TSS region transcription start site region 148963
Tssr145387 17 57226256 to 57226294 38 + TSS region transcription start site region 145387
Tssr148964 17 57226285 to 57226298 13 - TSS region transcription start site region 148964
Tssr148965 17 57226796 to 57226812 16 - TSS region transcription start site region 148965
Tssr148966 17 57226813 to 57226853 40 - TSS region transcription start site region 148966
Tssr145388 17 57226838 to 57226843 5 + TSS region transcription start site region 145388
D17Mit20 17 57227447 to 57227623 176 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 20
Hmtb8 17 57227447 to 57227623 176 QTL hemostasis and thrombosis rebleeding time 8
Pregq4 17 57227447 to 93199751 35972304 QTL pregnancy QTL 4
Obrq15 17 57227447 to 80578347 23350900 QTL obesity resistance QTL 15
Tssr148967 17 57228084 to 57228101 17 - TSS region transcription start site region 148967
D17Mit88 17 57229291 to 57229532 241 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 88
Tssr145389 17 57233202 to 57233231 29 + TSS region transcription start site region 145389
Gpr108 17 57234914 to 57248441 13527 - protein coding gene G protein-coupled receptor 108
Tssr5184 17 57236002 to 57236013 11 - TSS region transcription start site region 5184
Tssr148968 17 57242709 to 57242710 1 - TSS region transcription start site region 148968
Tssr148969 17 57244326 to 57244349 23 - TSS region transcription start site region 148969
Tssr148970 17 57247303 to 57247316 13 - TSS region transcription start site region 148970
Cpgi9400 17 57247305 to 57248380 1075 CpG island CpG island 9400
Tssr148971 17 57247331 to 57247343 12 - TSS region transcription start site region 148971
Tssr148972 17 57247348 to 57247372 24 - TSS region transcription start site region 148972
Tssr148973 17 57247632 to 57247694 62 - TSS region transcription start site region 148973
Tssr145390 17 57248074 to 57248085 11 + TSS region transcription start site region 145390
Cpgi9401 17 57249285 to 57250084 799 CpG island CpG island 9401
Tssr145391 17 57249450 to 57249522 72 + TSS region transcription start site region 145391
Trip10 17 57249455 to 57263665 14210 + protein coding gene thyroid hormone receptor interactor 10
Cpgi9402 17 57250348 to 57250952 604 CpG island CpG island 9402
D17Mit181 17 57252036 to 57252159 123 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 181
Tssr145392 17 57253947 to 57253956 9 + TSS region transcription start site region 145392
Tssr145393 17 57255960 to 57255967 7 + TSS region transcription start site region 145393
Gm46575 17 57263729 to 57268377 4648 - protein coding gene predicted gene, 46575
Cpgi9403 17 57275043 to 57275900 857 CpG island CpG island 9403
Tssr148974 17 57275470 to 57275487 17 - TSS region transcription start site region 148974
Cpgi9404 17 57276204 to 57276398 194 CpG island CpG island 9404
Tssr145394 17 57279094 to 57279123 29 + TSS region transcription start site region 145394
Vav1 17 57279100 to 57328031 48931 + protein coding gene vav 1 oncogene
Tssr145395 17 57279170 to 57279181 11 + TSS region transcription start site region 145395
Tssr145396 17 57281716 to 57281732 16 + TSS region transcription start site region 145396
Tssr145397 17 57281901 to 57281912 11 + TSS region transcription start site region 145397
Tssr145398 17 57285358 to 57285368 10 + TSS region transcription start site region 145398
Tssr148975 17 57290718 to 57290729 11 - TSS region transcription start site region 148975
Tssr148976 17 57290895 to 57290914 19 - TSS region transcription start site region 148976
Tssr148977 17 57292396 to 57292425 29 - TSS region transcription start site region 148977
Tssr145399 17 57303872 to 57303883 11 + TSS region transcription start site region 145399
Tssr145400 17 57303917 to 57303951 34 + TSS region transcription start site region 145400
Tssr145401 17 57303966 to 57303977 11 + TSS region transcription start site region 145401
Tssr145402 17 57311856 to 57311870 14 + TSS region transcription start site region 145402
Tssr145403 17 57316394 to 57316422 28 + TSS region transcription start site region 145403
Tssr145404 17 57316619 to 57316632 13 + TSS region transcription start site region 145404
Cpgi9405 17 57334795 to 57335040 245 CpG island CpG island 9405