MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:57086632-57126643

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tubb4a	17	57080066 to 57087782	7716	-	protein coding gene	tubulin, beta 4A class IVA
Cpgi9394	17	57087153 to 57087787	634		CpG island	CpG island 9394
Tssr148897	17	57087557 to 57087612	55	-	TSS region	transcription start site region 148897
Tssr148898	17	57087614 to 57087636	22	-	TSS region	transcription start site region 148898
Tssr148899	17	57087637 to 57087657	20	-	TSS region	transcription start site region 148899
Tssr5183	17	57087659 to 57087669	10	-	TSS region	transcription start site region 5183
Tssr148900	17	57087729 to 57087734	5	-	TSS region	transcription start site region 148900
Gm11110	17	57092023 to 57105942	13919	-	lincRNA gene	predicted gene 11110
Cpgi9395	17	57096587 to 57096766	179		CpG island	CpG island 9395
Gm46589	17	57096733 to 57098544	1811	+	lncRNA gene	predicted gene, 46589
Cpgi9396	17	57105192 to 57106114	922		CpG island	CpG island 9396
Tnfsf9	17	57105325 to 57107757	2432	+	protein coding gene	tumor necrosis factor (ligand) superfamily, member 9
Tssr145375	17	57105401 to 57105421	20	+	TSS region	transcription start site region 145375
Tssr148901	17	57105916 to 57105948	32	-	TSS region	transcription start site region 148901
Tssr145376	17	57106632 to 57106643	11	+	TSS region	transcription start site region 145376
D17Mit252	17	57107800 to 57107924	124		DNA segment	DNA segment, Chr 17, Massachusetts Institute of Technology 252
Gm49892	17	57115118 to 57115447	329	+	pseudogene	predicted gene, 49892