Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:57065066-57102782

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Crb3 17 57061627 to 57068117 6490 + protein coding gene crumbs family member 3
Dennd1c 17 57066051 to 57078510 12459 - protein coding gene DENN/MADD domain containing 1C
Gm49888 17 57068260 to 57069360 1100 - sense intronic lncRNA gene predicted gene, 49888
Tssr148877 17 57077042 to 57077067 25 - TSS region transcription start site region 148877
Tssr148878 17 57078410 to 57078417 7 - TSS region transcription start site region 148878
Tssr148879 17 57078447 to 57078458 11 - TSS region transcription start site region 148879
Tssr148880 17 57078459 to 57078484 25 - TSS region transcription start site region 148880
Tssr148881 17 57078490 to 57078519 29 - TSS region transcription start site region 148881
Tssr145371 17 57078566 to 57078609 43 + TSS region transcription start site region 145371
Tubb4a 17 57080066 to 57087782 7716 - protein coding gene tubulin, beta 4A class IVA
Tssr5182 17 57080219 to 57080244 25 + TSS region transcription start site region 5182
Tssr145372 17 57080247 to 57080285 38 + TSS region transcription start site region 145372
Tssr148882 17 57080362 to 57080415 53 - TSS region transcription start site region 148882
Tssr148883 17 57080457 to 57080508 51 - TSS region transcription start site region 148883
Tssr148884 17 57080530 to 57080577 47 - TSS region transcription start site region 148884
Tssr145373 17 57080594 to 57080605 11 + TSS region transcription start site region 145373
Tssr148885 17 57080607 to 57080625 18 - TSS region transcription start site region 148885
Tssr148886 17 57080634 to 57080646 12 - TSS region transcription start site region 148886
Tssr148887 17 57080658 to 57080662 4 - TSS region transcription start site region 148887
Tssr148888 17 57080685 to 57080705 20 - TSS region transcription start site region 148888
Tssr145374 17 57080688 to 57080721 33 + TSS region transcription start site region 145374
Tssr148889 17 57080722 to 57080729 7 - TSS region transcription start site region 148889
Tssr148890 17 57080818 to 57080830 12 - TSS region transcription start site region 148890
Tssr148891 17 57080936 to 57080950 14 - TSS region transcription start site region 148891
Tssr148892 17 57080956 to 57080969 13 - TSS region transcription start site region 148892
Cpgi9393 17 57081089 to 57081840 751 CpG island CpG island 9393
Tssr148893 17 57081170 to 57081182 12 - TSS region transcription start site region 148893
Tssr148894 17 57081242 to 57081254 12 - TSS region transcription start site region 148894
Tssr148895 17 57081646 to 57081658 12 - TSS region transcription start site region 148895
Tssr148896 17 57081708 to 57081725 17 - TSS region transcription start site region 148896
Cpgi9394 17 57087153 to 57087787 634 CpG island CpG island 9394
Tssr148897 17 57087557 to 57087612 55 - TSS region transcription start site region 148897
Tssr148898 17 57087614 to 57087636 22 - TSS region transcription start site region 148898
Tssr148899 17 57087637 to 57087657 20 - TSS region transcription start site region 148899
Tssr5183 17 57087659 to 57087669 10 - TSS region transcription start site region 5183
Tssr148900 17 57087729 to 57087734 5 - TSS region transcription start site region 148900
Gm11110 17 57092023 to 57105942 13919 - lincRNA gene predicted gene 11110
Cpgi9395 17 57096587 to 57096766 179 CpG island CpG island 9395
Gm46589 17 57096733 to 57098544 1811 + lncRNA gene predicted gene, 46589