MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:56859395-56889398

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Acsbg2	17	56843103 to 56874447	31344	-	protein coding gene	acyl-CoA synthetase bubblegum family member 2
Tssr145346	17	56861532 to 56861542	10	+	TSS region	transcription start site region 145346
Tssr145347	17	56861549 to 56861561	12	+	TSS region	transcription start site region 145347
Tssr5178	17	56866330 to 56866344	14	+	TSS region	transcription start site region 5178
Tssr148839	17	56874395 to 56874398	3	-	TSS region	transcription start site region 148839
Tssr148840	17	56874400 to 56874414	14	-	TSS region	transcription start site region 148840
Tssr148841	17	56874421 to 56874460	39	-	TSS region	transcription start site region 148841
Tssr145348	17	56875471 to 56875489	18	+	TSS region	transcription start site region 145348
1700061G19Rik	17	56875477 to 56888904	13427	+	protein coding gene	RIKEN cDNA 1700061G19 gene
Tssr145349	17	56875498 to 56875507	9	+	TSS region	transcription start site region 145349
Tssr145350	17	56875509 to 56875518	9	+	TSS region	transcription start site region 145350
Tssr145351	17	56875523 to 56875535	12	+	TSS region	transcription start site region 145351
Tssr145352	17	56877127 to 56877140	13	+	TSS region	transcription start site region 145352
Tssr145353	17	56878637 to 56878640	3	+	TSS region	transcription start site region 145353
Cpgi9382	17	56883216 to 56883962	746		CpG island	CpG island 9382
Tssr148842	17	56883851 to 56883862	11	-	TSS region	transcription start site region 148842
Tssr145354	17	56883973 to 56884019	46	+	TSS region	transcription start site region 145354