Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:56837611-56990415

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acsbg2 17 56843103 to 56874447 31344 - protein coding gene acyl-CoA synthetase bubblegum family member 2
Tssr145346 17 56861532 to 56861542 10 + TSS region transcription start site region 145346
Tssr145347 17 56861549 to 56861561 12 + TSS region transcription start site region 145347
Tssr5178 17 56866330 to 56866344 14 + TSS region transcription start site region 5178
Tssr148839 17 56874395 to 56874398 3 - TSS region transcription start site region 148839
Tssr148840 17 56874400 to 56874414 14 - TSS region transcription start site region 148840
Tssr148841 17 56874421 to 56874460 39 - TSS region transcription start site region 148841
Tssr145348 17 56875471 to 56875489 18 + TSS region transcription start site region 145348
1700061G19Rik 17 56875477 to 56888904 13427 + protein coding gene RIKEN cDNA 1700061G19 gene
Tssr145349 17 56875498 to 56875507 9 + TSS region transcription start site region 145349
Tssr145350 17 56875509 to 56875518 9 + TSS region transcription start site region 145350
Tssr145351 17 56875523 to 56875535 12 + TSS region transcription start site region 145351
Tssr145352 17 56877127 to 56877140 13 + TSS region transcription start site region 145352
Tssr145353 17 56878637 to 56878640 3 + TSS region transcription start site region 145353
Cpgi9382 17 56883216 to 56883962 746 CpG island CpG island 9382
Tssr148842 17 56883851 to 56883862 11 - TSS region transcription start site region 148842
Tssr145354 17 56883973 to 56884019 46 + TSS region transcription start site region 145354
Mllt1 17 56892611 to 56935415 42804 - protein coding gene myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1
Tssr148843 17 56905799 to 56905805 6 - TSS region transcription start site region 148843
Tssr148844 17 56906218 to 56906234 16 - TSS region transcription start site region 148844
Tssr145355 17 56931699 to 56931708 9 + TSS region transcription start site region 145355
Cpgi9383 17 56934785 to 56936014 1229 CpG island CpG island 9383
Tssr148845 17 56935413 to 56935504 91 - TSS region transcription start site region 148845
Acer1 17 56953490 to 56982126 28636 - protein coding gene alkaline ceramidase 1
Gm49887 17 56958320 to 56959424 1104 + lincRNA gene predicted gene, 49887
D17Mit158.1 17 56976288 to 56976399 111 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 158.1
D17Mit158 17 56976380 to 56976491 111 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 158
D17Mit158.3 17 56976472 to 56976631 159 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 158.3
Tssr145356 17 56981320 to 56981329 9 + TSS region transcription start site region 145356
Tssr148846 17 56982104 to 56982118 14 - TSS region transcription start site region 148846
Tssr148847 17 56982120 to 56982161 41 - TSS region transcription start site region 148847
Gm33509 17 56988162 to 56990107 1945 - lncRNA gene predicted gene, 33509
Cpgi9384 17 56989763 to 56990819 1056 CpG island CpG island 9384
Tssr145357 17 56990260 to 56990267 7 + TSS region transcription start site region 145357
Tssr145358 17 56990284 to 56990330 46 + TSS region transcription start site region 145358
Clpp 17 56990305 to 56996188 5883 + protein coding gene caseinolytic mitochondrial matrix peptidase proteolytic subunit
Tssr145359 17 56990331 to 56990350 19 + TSS region transcription start site region 145359
Tssr145360 17 56990398 to 56990410 12 + TSS region transcription start site region 145360