Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:56774400-56974414

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rfx2 17 56775897 to 56831008 55111 - protein coding gene regulatory factor X, 2 (influences HLA class II expression)
Gm41604 17 56791989 to 56796267 4278 + lncRNA gene predicted gene, 41604
Tssr145343 17 56793904 to 56793917 13 + TSS region transcription start site region 145343
Tssr148836 17 56794712 to 56794717 5 - TSS region transcription start site region 148836
Cpgi9380 17 56829792 to 56830236 444 CpG island CpG island 9380
Cpgi9381 17 56830456 to 56831739 1283 CpG island CpG island 9381
Tssr148837 17 56830916 to 56831005 89 - TSS region transcription start site region 148837
Tssr148838 17 56831058 to 56831128 70 - TSS region transcription start site region 148838
Tssr145344 17 56831353 to 56831367 14 + TSS region transcription start site region 145344
Tssr145345 17 56831676 to 56831680 4 + TSS region transcription start site region 145345
Acsbg2 17 56843103 to 56874447 31344 - protein coding gene acyl-CoA synthetase bubblegum family member 2
Tssr145346 17 56861532 to 56861542 10 + TSS region transcription start site region 145346
Tssr145347 17 56861549 to 56861561 12 + TSS region transcription start site region 145347
Tssr5178 17 56866330 to 56866344 14 + TSS region transcription start site region 5178
Tssr148839 17 56874395 to 56874398 3 - TSS region transcription start site region 148839
Tssr148840 17 56874400 to 56874414 14 - TSS region transcription start site region 148840
Tssr148841 17 56874421 to 56874460 39 - TSS region transcription start site region 148841
Tssr145348 17 56875471 to 56875489 18 + TSS region transcription start site region 145348
1700061G19Rik 17 56875477 to 56888904 13427 + protein coding gene RIKEN cDNA 1700061G19 gene
Tssr145349 17 56875498 to 56875507 9 + TSS region transcription start site region 145349
Tssr145350 17 56875509 to 56875518 9 + TSS region transcription start site region 145350
Tssr145351 17 56875523 to 56875535 12 + TSS region transcription start site region 145351
Tssr145352 17 56877127 to 56877140 13 + TSS region transcription start site region 145352
Tssr145353 17 56878637 to 56878640 3 + TSS region transcription start site region 145353
Cpgi9382 17 56883216 to 56883962 746 CpG island CpG island 9382
Tssr148842 17 56883851 to 56883862 11 - TSS region transcription start site region 148842
Tssr145354 17 56883973 to 56884019 46 + TSS region transcription start site region 145354
Mllt1 17 56892611 to 56935415 42804 - protein coding gene myeloid/lymphoid or mixed-lineage leukemia; translocated to, 1
Tssr148843 17 56905799 to 56905805 6 - TSS region transcription start site region 148843
Tssr148844 17 56906218 to 56906234 16 - TSS region transcription start site region 148844
Tssr145355 17 56931699 to 56931708 9 + TSS region transcription start site region 145355
Cpgi9383 17 56934785 to 56936014 1229 CpG island CpG island 9383
Tssr148845 17 56935413 to 56935504 91 - TSS region transcription start site region 148845
Acer1 17 56953490 to 56982126 28636 - protein coding gene alkaline ceramidase 1
Gm49887 17 56958320 to 56959424 1104 + lincRNA gene predicted gene, 49887