Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:56623223-56723232

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lonp1 17 56614297 to 56626887 12590 - protein coding gene lon peptidase 1, mitochondrial
Cpgi9369 17 56626282 to 56627793 1511 CpG island CpG island 9369
Tssr148829 17 56626872 to 56626893 21 - TSS region transcription start site region 148829
Tssr145317 17 56628118 to 56628148 30 + TSS region transcription start site region 145317
Catsperd 17 56628143 to 56664456 36313 + protein coding gene cation channel sperm associated auxiliary subunit delta
Tssr145318 17 56628157 to 56628171 14 + TSS region transcription start site region 145318
Tssr145319 17 56638263 to 56638267 4 + TSS region transcription start site region 145319
D17Mit239 17 56644471 to 56644576 105 DNA segment DNA Segment, Chr 17, Massachusetts Institute of Technology 239
Tssr145320 17 56647735 to 56647766 31 + TSS region transcription start site region 145320
Gm33461 17 56659459 to 56664026 4567 - lncRNA gene predicted gene, 33461
Tssr145321 17 56659693 to 56659698 5 + TSS region transcription start site region 145321
Cpgi9370 17 56668551 to 56669076 525 CpG island CpG island 9370
Cpgi9371 17 56672849 to 56674139 1290 CpG island CpG island 9371
Tssr145322 17 56673223 to 56673232 9 + TSS region transcription start site region 145322
Tssr145323 17 56673273 to 56673287 14 + TSS region transcription start site region 145323
Ranbp3 17 56673294 to 56711764 38470 + protein coding gene RAN binding protein 3
Tssr145324 17 56673321 to 56673328 7 + TSS region transcription start site region 145324
Tssr145325 17 56673356 to 56673392 36 + TSS region transcription start site region 145325
Tssr145326 17 56680545 to 56680552 7 + TSS region transcription start site region 145326
Tssr145327 17 56696727 to 56696749 22 + TSS region transcription start site region 145327
Tssr145328 17 56708858 to 56708868 10 + TSS region transcription start site region 145328
Tssr148830 17 56709840 to 56709889 49 - TSS region transcription start site region 148830
Tssr145329 17 56709906 to 56709934 28 + TSS region transcription start site region 145329
Tssr145330 17 56709936 to 56709975 39 + TSS region transcription start site region 145330
Tssr145331 17 56709981 to 56709992 11 + TSS region transcription start site region 145331
Tssr145332 17 56710004 to 56710017 13 + TSS region transcription start site region 145332
Tssr145333 17 56710028 to 56710039 11 + TSS region transcription start site region 145333
Tssr145334 17 56710064 to 56710071 7 + TSS region transcription start site region 145334
Tssr145335 17 56710942 to 56710954 12 + TSS region transcription start site region 145335
Ccpn-ps 17 56711695 to 56712652 957 - pseudogene calcyphosine, pseudogene
Vmac 17 56713932 to 56717699 3767 - protein coding gene vimentin-type intermediate filament associated coiled-coil protein
Cpgi9372 17 56716470 to 56718363 1893 CpG island CpG island 9372
Tssr148831 17 56716788 to 56716858 70 - TSS region transcription start site region 148831
Tssr148832 17 56717681 to 56717709 28 - TSS region transcription start site region 148832
Tssr145336 17 56717759 to 56717819 60 + TSS region transcription start site region 145336
Ndufa11 17 56717767 to 56722141 4374 + protein coding gene NADH:ubiquinone oxidoreductase subunit A11
Tssr148833 17 56718030 to 56718042 12 - TSS region transcription start site region 148833