Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:56534961-56634968

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20219 17 56551414 to 56554387 2973 - lncRNA gene predicted gene, 20219
Tssr148816 17 56554382 to 56554426 44 - TSS region transcription start site region 148816
Safb2 17 56560965 to 56584585 23620 - protein coding gene scaffold attachment factor B2
Tssr148817 17 56571234 to 56571264 30 - TSS region transcription start site region 148817
Tssr148818 17 56571500 to 56571513 13 - TSS region transcription start site region 148818
Cpgi9365 17 56583696 to 56585776 2080 CpG island CpG island 9365
Tssr148819 17 56584309 to 56584323 14 - TSS region transcription start site region 148819
Tssr148820 17 56584507 to 56584568 61 - TSS region transcription start site region 148820
Tssr148821 17 56584594 to 56584605 11 - TSS region transcription start site region 148821
Tssr145307 17 56584822 to 56584827 5 + TSS region transcription start site region 145307
Safb 17 56584830 to 56606294 21464 + protein coding gene scaffold attachment factor B
Tssr145308 17 56584923 to 56584932 9 + TSS region transcription start site region 145308
Tssr145309 17 56584948 to 56584959 11 + TSS region transcription start site region 145309
Tssr145310 17 56584961 to 56584968 7 + TSS region transcription start site region 145310
Tssr145311 17 56584973 to 56585031 58 + TSS region transcription start site region 145311
Tssr145312 17 56593947 to 56593961 14 + TSS region transcription start site region 145312
Cpgi9366 17 56603531 to 56603829 298 CpG island CpG island 9366
Micos13 17 56607452 to 56609771 2319 - protein coding gene mitochondrial contact site and cristae organizing system subunit 13
Cpgi9367 17 56609322 to 56610299 977 CpG island CpG island 9367
Tssr148822 17 56609675 to 56609686 11 - TSS region transcription start site region 148822
Tssr148823 17 56609689 to 56609715 26 - TSS region transcription start site region 148823
Tssr148824 17 56609804 to 56609819 15 - TSS region transcription start site region 148824
Tssr148825 17 56609823 to 56609834 11 - TSS region transcription start site region 148825
Tssr145313 17 56609885 to 56609916 31 + TSS region transcription start site region 145313
Tssr148826 17 56609928 to 56609939 11 - TSS region transcription start site region 148826
Tssr148827 17 56609958 to 56609971 13 - TSS region transcription start site region 148827
Tssr148828 17 56609988 to 56610005 17 - TSS region transcription start site region 148828
Gm46588 17 56610006 to 56610751 745 + lncRNA gene predicted gene, 46588
Cpgi9368 17 56613235 to 56614360 1125 CpG island CpG island 9368
Tssr145314 17 56613355 to 56613358 3 + TSS region transcription start site region 145314
Tssr145315 17 56613392 to 56613425 33 + TSS region transcription start site region 145315
Rpl36 17 56613416 to 56614243 827 + protein coding gene ribosomal protein L36
Tssr145316 17 56613436 to 56613477 41 + TSS region transcription start site region 145316
Tssr5177 17 56613498 to 56613501 3 + TSS region transcription start site region 5177
Lonp1 17 56614297 to 56626887 12590 - protein coding gene lon peptidase 1, mitochondrial
Cpgi9369 17 56626282 to 56627793 1511 CpG island CpG island 9369
Tssr148829 17 56626872 to 56626893 21 - TSS region transcription start site region 148829
Tssr145317 17 56628118 to 56628148 30 + TSS region transcription start site region 145317
Catsperd 17 56628143 to 56664456 36313 + protein coding gene cation channel sperm associated auxiliary subunit delta
Tssr145318 17 56628157 to 56628171 14 + TSS region transcription start site region 145318