Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:56230461-56421584

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49879 17 56238909 to 56239361 452 + pseudogene predicted gene, 49879
Cpgi9350 17 56241714 to 56242284 570 CpG island CpG island 9350
A230051N06Rik 17 56241717 to 56242805 1088 + lincRNA gene RIKEN cDNA A230051N06 gene
Tssr145290 17 56241740 to 56241751 11 + TSS region transcription start site region 145290
Tssr145291 17 56241752 to 56241786 34 + TSS region transcription start site region 145291
Mir7b 17 56242988 to 56243098 110 + miRNA gene microRNA 7b
Cpgi9351 17 56255847 to 56256299 452 CpG island CpG island 9351
Cpgi9352 17 56256541 to 56257954 1413 CpG island CpG island 9352
Tssr145292 17 56256802 to 56256836 34 + TSS region transcription start site region 145292
Fem1a 17 56256810 to 56263610 6800 + protein coding gene feminization 1 homolog a (C. elegans)
Tssr145293 17 56265827 to 56265831 4 + TSS region transcription start site region 145293
Ticam1 17 56269462 to 56276767 7305 - protein coding gene toll-like receptor adaptor molecule 1
Tssr148775 17 56271249 to 56271263 14 - TSS region transcription start site region 148775
Tssr148776 17 56276703 to 56276714 11 - TSS region transcription start site region 148776
Tssr148777 17 56276718 to 56276749 31 - TSS region transcription start site region 148777
Tssr148778 17 56276750 to 56276773 23 - TSS region transcription start site region 148778
Plin3 17 56278962 to 56290511 11549 - protein coding gene perilipin 3
Tssr148779 17 56287863 to 56287866 3 - TSS region transcription start site region 148779
Tssr148780 17 56287880 to 56287909 29 - TSS region transcription start site region 148780
Tssr148781 17 56287925 to 56287954 29 - TSS region transcription start site region 148781
Tssr148782 17 56287957 to 56288001 44 - TSS region transcription start site region 148782
Tssr145294 17 56289576 to 56289579 3 + TSS region transcription start site region 145294
Tssr148783 17 56290065 to 56290084 19 - TSS region transcription start site region 148783
Cpgi9353 17 56290346 to 56290631 285 CpG island CpG island 9353
Tssr148784 17 56290476 to 56290482 6 - TSS region transcription start site region 148784
Tssr148785 17 56290499 to 56290529 30 - TSS region transcription start site region 148785
Cpgi9354 17 56291313 to 56291630 317 CpG island CpG island 9354
Arrdc5 17 56294111 to 56300286 6175 - protein coding gene arrestin domain containing 5
Cpgi9355 17 56294284 to 56294548 264 CpG island CpG island 9355
Tssr148786 17 56300229 to 56300248 19 - TSS region transcription start site region 148786
Tssr148787 17 56300252 to 56300270 18 - TSS region transcription start site region 148787
Tssr148788 17 56300288 to 56300297 9 - TSS region transcription start site region 148788
Tssr148789 17 56301162 to 56301202 40 - TSS region transcription start site region 148789
Cpgi9356 17 56303216 to 56304658 1442 CpG island CpG island 9356
Tssr145295 17 56303331 to 56303349 18 + TSS region transcription start site region 145295
Uhrf1 17 56303337 to 56323486 20149 + protein coding gene ubiquitin-like, containing PHD and RING finger domains, 1
Tssr145296 17 56303353 to 56303378 25 + TSS region transcription start site region 145296
Tssr145297 17 56303396 to 56303418 22 + TSS region transcription start site region 145297
Tssr145298 17 56303427 to 56303467 40 + TSS region transcription start site region 145298
Tssr145299 17 56304204 to 56304221 17 + TSS region transcription start site region 145299
Tssr145300 17 56304228 to 56304247 19 + TSS region transcription start site region 145300
Tssr145301 17 56304263 to 56304274 11 + TSS region transcription start site region 145301
Tssr145302 17 56304339 to 56304355 16 + TSS region transcription start site region 145302
Cpgi9357 17 56325461 to 56326584 1123 CpG island CpG island 9357
Tssr145303 17 56326045 to 56326097 52 + TSS region transcription start site region 145303
Kdm4b 17 56326062 to 56402870 76808 + protein coding gene lysine (K)-specific demethylase 4B
Tssr145304 17 56372438 to 56372448 10 + TSS region transcription start site region 145304
Gm32715 17 56376322 to 56388658 12336 - lncRNA gene predicted gene, 32715
Tssr148790 17 56388326 to 56388343 17 - TSS region transcription start site region 148790
Ptprs 17 56412426 to 56476480 64054 - protein coding gene protein tyrosine phosphatase, receptor type, S
Tssr148791 17 56412761 to 56412773 12 - TSS region transcription start site region 148791
Tssr148792 17 56412992 to 56412997 5 - TSS region transcription start site region 148792
Tssr148793 17 56413077 to 56413123 46 - TSS region transcription start site region 148793
Tssr148794 17 56417347 to 56417357 10 - TSS region transcription start site region 148794
Mir6977 17 56418846 to 56418909 63 - miRNA gene microRNA 6977