Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:56083245-56123263

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hdgfl2 17 56079634 to 56100607 20973 + protein coding gene HDGF like 2
n-TEctc4 17 56092001 to 56092072 71 - tRNA gene nuclear encoded tRNA glutamic acid 4 (anticodon CTC)
Tssr145285 17 56092505 to 56092507 2 + TSS region transcription start site region 145285
Plin4 17 56100591 to 56109803 9212 - protein coding gene perilipin 4
Tssr5173 17 56103245 to 56103263 18 - TSS region transcription start site region 5173
Tssr148740 17 56108657 to 56108678 21 - TSS region transcription start site region 148740
Tssr148741 17 56109717 to 56109737 20 - TSS region transcription start site region 148741
Tssr148742 17 56109744 to 56109755 11 - TSS region transcription start site region 148742
Tssr148743 17 56109756 to 56109767 11 - TSS region transcription start site region 148743
Tssr148744 17 56109775 to 56109794 19 - TSS region transcription start site region 148744
Tssr148745 17 56109800 to 56109806 6 - TSS region transcription start site region 148745
Tssr148746 17 56109815 to 56109824 9 - TSS region transcription start site region 148746
Plin5 17 56111601 to 56117596 5995 - protein coding gene perilipin 5
Cpgi9339 17 56117182 to 56117727 545 CpG island CpG island 9339
Tssr148747 17 56117265 to 56117283 18 - TSS region transcription start site region 148747
Tssr148748 17 56117537 to 56117551 14 - TSS region transcription start site region 148748
Tssr148749 17 56117577 to 56117588 11 - TSS region transcription start site region 148749
Lrg1 17 56119678 to 56121946 2268 - protein coding gene leucine-rich alpha-2-glycoprotein 1
Cpgi9340 17 56119796 to 56120927 1131 CpG island CpG island 9340
Tssr148750 17 56120116 to 56120131 15 - TSS region transcription start site region 148750
Tssr5174 17 56120194 to 56120215 21 + TSS region transcription start site region 5174
Tssr148751 17 56120293 to 56120314 21 - TSS region transcription start site region 148751
Tssr148752 17 56120348 to 56120366 18 - TSS region transcription start site region 148752
Tssr148753 17 56120613 to 56120620 7 - TSS region transcription start site region 148753
Tssr148754 17 56120671 to 56120681 10 - TSS region transcription start site region 148754
Tssr148755 17 56120793 to 56120818 25 - TSS region transcription start site region 148755
Tssr148756 17 56120832 to 56120848 16 - TSS region transcription start site region 148756
Tssr148757 17 56121010 to 56121028 18 - TSS region transcription start site region 148757
Tssr148758 17 56121030 to 56121063 33 - TSS region transcription start site region 148758
Tssr148759 17 56121897 to 56121920 23 - TSS region transcription start site region 148759
Tssr5175 17 56121924 to 56121942 18 - TSS region transcription start site region 5175
Tssr148760 17 56121951 to 56121958 7 - TSS region transcription start site region 148760
Tssr148761 17 56121965 to 56121986 21 - TSS region transcription start site region 148761
Tssr148762 17 56121994 to 56122001 7 - TSS region transcription start site region 148762
Sema6b 17 56123085 to 56140343 17258 - protein coding gene sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B