Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:55856874-56007468

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp119a 17 55864892 to 55878930 14038 - protein coding gene zinc finger protein 119a
Cpgi9325 17 55878796 to 55879386 590 CpG island CpG island 9325
Tssr5171 17 55888182 to 55888183 1 + TSS region transcription start site region 5171
Cpgi9326 17 55891875 to 55892251 376 CpG island CpG island 9326
Zfp959 17 55892093 to 55898928 6835 + protein coding gene zinc finger protein 959
Gm41603 17 55905674 to 55932205 26531 - lncRNA gene predicted gene, 41603
Rpl21-ps6 17 55915403 to 55915870 467 - pseudogene ribosomal protein L21, pseudogene 6
Cpgi9327 17 55931874 to 55932468 594 CpG island CpG island 9327
Zfp119b 17 55938381 to 55949500 11119 - protein coding gene zinc finger protein 119b
Tssr145247 17 55952628 to 55952699 71 + TSS region transcription start site region 145247
Ebi3 17 55952640 to 55957022 4382 + protein coding gene Epstein-Barr virus induced gene 3
Tssr145248 17 55952716 to 55952725 9 + TSS region transcription start site region 145248
Tssr145249 17 55952728 to 55952739 11 + TSS region transcription start site region 145249
Tssr145250 17 55952744 to 55952758 14 + TSS region transcription start site region 145250
Tssr145251 17 55952779 to 55952782 3 + TSS region transcription start site region 145251
Tssr145252 17 55952791 to 55952796 5 + TSS region transcription start site region 145252
Tssr145253 17 55952798 to 55952814 16 + TSS region transcription start site region 145253
Tssr145254 17 55952821 to 55952838 17 + TSS region transcription start site region 145254
Tssr145255 17 55952851 to 55952862 11 + TSS region transcription start site region 145255
Tssr145256 17 55953894 to 55953906 12 + TSS region transcription start site region 145256
Tssr145257 17 55954318 to 55954338 20 + TSS region transcription start site region 145257
Tssr145258 17 55954340 to 55954371 31 + TSS region transcription start site region 145258
Gm16712 17 55954771 to 55959381 4610 - antisense lncRNA gene predicted gene, 16712
Cpgi9328 17 55955980 to 55956471 491 CpG island CpG island 9328
Cpgi9329 17 55958973 to 55959464 491 CpG island CpG island 9329
Tssr145259 17 55959125 to 55959140 15 + TSS region transcription start site region 145259
Tssr145260 17 55959146 to 55959182 36 + TSS region transcription start site region 145260
Yju2 17 55959187 to 55968285 9098 + protein coding gene YJU2 splicing factor
Tssr145261 17 55959765 to 55959784 19 + TSS region transcription start site region 145261
Tssr145262 17 55961597 to 55961610 13 + TSS region transcription start site region 145262
Cpgi9330 17 55969932 to 55970888 956 CpG island CpG island 9330
Tssr145263 17 55970451 to 55970485 34 + TSS region transcription start site region 145263
Shd 17 55970467 to 55976625 6158 + protein coding gene src homology 2 domain-containing transforming protein D
Tssr145264 17 55970496 to 55970577 81 + TSS region transcription start site region 145264
Tssr145265 17 55970589 to 55970603 14 + TSS region transcription start site region 145265
Tssr145266 17 55970646 to 55970660 14 + TSS region transcription start site region 145266
Cpgi9331 17 55971195 to 55971441 246 CpG island CpG island 9331
Cpgi9332 17 55986377 to 55986891 514 CpG island CpG island 9332
Tssr145267 17 55986466 to 55986491 25 + TSS region transcription start site region 145267
Tssr145268 17 55986494 to 55986531 37 + TSS region transcription start site region 145268
Fsd1 17 55986509 to 55996881 10372 + protein coding gene fibronectin type 3 and SPRY domain-containing protein
Tssr145269 17 55986538 to 55986549 11 + TSS region transcription start site region 145269
Stap2 17 55997077 to 56005584 8507 - protein coding gene signal transducing adaptor family member 2
Cpgi9333 17 55999771 to 56000726 955 CpG island CpG island 9333
Tssr148727 17 56000162 to 56000173 11 - TSS region transcription start site region 148727
Tssr148728 17 56000230 to 56000281 51 - TSS region transcription start site region 148728
Tssr148729 17 56005558 to 56005565 7 - TSS region transcription start site region 148729
Tssr148730 17 56005566 to 56005597 31 - TSS region transcription start site region 148730
Tssr145270 17 56005672 to 56005712 40 + TSS region transcription start site region 145270
Tssr148731 17 56005889 to 56005911 22 - TSS region transcription start site region 148731