Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:55507138-55917760

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St6gal2 17 55445382 to 55514581 69199 + protein coding gene beta galactoside alpha 2,6 sialyltransferase 2
Tssr145243 17 55510262 to 55510265 3 + TSS region transcription start site region 145243
Gm26547 17 55557166 to 55563507 6341 + lincRNA gene predicted gene, 26547
Vmn2r118 17 55592329 to 55626360 34031 - protein coding gene vomeronasal 2, receptor 118
Pot1b 17 55651951 to 55712628 60677 - protein coding gene protection of telomeres 1B
Gm22654 17 55661637 to 55661741 104 + snRNA gene predicted gene, 22654
Gm18648 17 55700407 to 55701817 1410 + pseudogene predicted gene, 18648
Cpgi9324 17 55712138 to 55712760 622 CpG island CpG island 9324
Tssr148725 17 55712571 to 55712630 59 - TSS region transcription start site region 148725
Tssr148726 17 55712634 to 55712655 21 - TSS region transcription start site region 148726
Tssr145244 17 55749978 to 55749992 14 + TSS region transcription start site region 145244
Adgre4 17 55749984 to 55853662 103678 + protein coding gene adhesion G protein-coupled receptor E4
Tssr145245 17 55750017 to 55750028 11 + TSS region transcription start site region 145245
Tssr145246 17 55750029 to 55750046 17 + TSS region transcription start site region 145246
Gm18365 17 55767886 to 55768471 585 - pseudogene predicted gene, 18365
Gm18417 17 55850482 to 55851129 647 - pseudogene predicted gene, 18417
Zfp119a 17 55864892 to 55878930 14038 - protein coding gene zinc finger protein 119a
Cpgi9325 17 55878796 to 55879386 590 CpG island CpG island 9325
Tssr5171 17 55888182 to 55888183 1 + TSS region transcription start site region 5171
Cpgi9326 17 55891875 to 55892251 376 CpG island CpG island 9326
Zfp959 17 55892093 to 55898928 6835 + protein coding gene zinc finger protein 959
Gm41603 17 55905674 to 55932205 26531 - lncRNA gene predicted gene, 41603
Rpl21-ps6 17 55915403 to 55915870 467 - pseudogene ribosomal protein L21, pseudogene 6