Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:54286936-55017072

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc5a7 17 54273590 to 54299034 25444 - protein coding gene solute carrier family 5 (choline transporter), member 7
Tssr148723 17 54297185 to 54297195 10 - TSS region transcription start site region 148723
Cpgi9321 17 54298305 to 54298933 628 CpG island CpG island 9321
Tssr5170 17 54298451 to 54298460 9 - TSS region transcription start site region 5170
Tssr148724 17 54298718 to 54298732 14 - TSS region transcription start site region 148724
Gm9224 17 54346540 to 54347593 1053 - pseudogene predicted gene 9224
1700025K24Rik 17 54352583 to 54370074 17491 - lincRNA gene RIKEN cDNA 1700025K24 gene
Gm49919 17 54354718 to 54355159 441 - pseudogene predicted gene, 49919
Trp53-ps 17 54419680 to 54420841 1161 + pseudogene transformation related protein 53, pseudogene
Tssr145235 17 54420718 to 54420755 37 + TSS region transcription start site region 145235
Gm4946 17 54507415 to 54508222 807 + pseudogene predicted gene 4946
D17Mit1009 17 54557272 to 54557398 126 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 1009
Gm26291 17 54651936 to 54652072 136 + snoRNA gene predicted gene, 26291
Gm32055 17 54852562 to 54860472 7910 + lincRNA gene predicted gene, 32055
Tssr145236 17 54859279 to 54859287 8 + TSS region transcription start site region 145236