Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:5403189-5743193

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D17Jcs98 17 5403550 to 5403768 218 DNA segment DNA segment, Chr 17, John C. Schimenti 98
Tssr142410 17 5404075 to 5404082 7 + TSS region transcription start site region 142410
Tssr146299 17 5406632 to 5406664 32 - TSS region transcription start site region 146299
Tmem242 17 5410870 to 5440259 29389 - protein coding gene transmembrane protein 242
Gm29050 17 5412064 to 5413483 1419 + antisense lncRNA gene predicted gene 29050
Ldhal6b 17 5417323 to 5418767 1444 - protein coding gene lactate dehydrogenase A-like 6B
Cpgi8558 17 5418294 to 5418803 509 CpG island CpG island 8558
Tssr146300 17 5418664 to 5418742 78 - TSS region transcription start site region 146300
Gm22475 17 5421464 to 5421565 101 + miRNA gene predicted gene, 22475
Tssr146301 17 5440229 to 5440263 34 - TSS region transcription start site region 146301
Gm8363 17 5481123 to 5482964 1841 - pseudogene predicted gene 8363
Cpgi8559 17 5491605 to 5493723 2118 CpG island CpG island 8559
Tssr146302 17 5492456 to 5492479 23 - TSS region transcription start site region 146302
Tssr146303 17 5492497 to 5492517 20 - TSS region transcription start site region 146303
Zdhhc14 17 5492557 to 5753811 261254 + protein coding gene zinc finger, DHHC domain containing 14
Tssr142411 17 5492558 to 5492646 88 + TSS region transcription start site region 142411
Tssr142412 17 5492914 to 5492954 40 + TSS region transcription start site region 142412
Tssr142413 17 5492982 to 5492989 7 + TSS region transcription start site region 142413
Tssr142414 17 5493155 to 5493196 41 + TSS region transcription start site region 142414
Tssr146304 17 5493975 to 5493997 22 - TSS region transcription start site region 146304
Tssr142415 17 5497457 to 5497465 8 + TSS region transcription start site region 142415
Tssr142416 17 5522035 to 5522058 23 + TSS region transcription start site region 142416
Tssr142417 17 5538504 to 5538510 6 + TSS region transcription start site region 142417
Tssr142418 17 5540109 to 5540124 15 + TSS region transcription start site region 142418
Tssr142419 17 5547888 to 5547901 13 + TSS region transcription start site region 142419
Tssr146305 17 5573189 to 5573193 4 - TSS region transcription start site region 146305
Tssr142420 17 5574914 to 5574941 27 + TSS region transcription start site region 142420
Tssr142421 17 5574951 to 5574964 13 + TSS region transcription start site region 142421
Tssr142422 17 5575004 to 5575032 28 + TSS region transcription start site region 142422
Tssr142423 17 5581012 to 5581016 4 + TSS region transcription start site region 142423
D17Tu1 17 5581076 to 5581317 241 DNA segment DNA segment, Chr 17, Tubingen 1
Tssr146306 17 5591643 to 5591675 32 - TSS region transcription start site region 146306
Tssr142424 17 5661700 to 5661712 12 + TSS region transcription start site region 142424
Tssr142425 17 5685677 to 5685689 12 + TSS region transcription start site region 142425
Tssr142426 17 5688088 to 5688132 44 + TSS region transcription start site region 142426
Tssr142427 17 5700082 to 5700121 39 + TSS region transcription start site region 142427
Tssr142428 17 5700166 to 5700204 38 + TSS region transcription start site region 142428
Tssr142429 17 5713139 to 5713143 4 + TSS region transcription start site region 142429
Tssr142430 17 5718011 to 5718028 17 + TSS region transcription start site region 142430
Tssr142431 17 5720856 to 5720879 23 + TSS region transcription start site region 142431
Tssr142432 17 5726535 to 5726538 3 + TSS region transcription start site region 142432