Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:53518399-53738412

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pp2d1 17 53507460 to 53539451 31991 - protein coding gene protein phosphatase 2C-like domain containing 1
D17Mit274 17 53538508 to 53538707 199 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 274
Tssr148706 17 53539385 to 53539407 22 - TSS region transcription start site region 148706
Tssr148707 17 53539411 to 53539459 48 - TSS region transcription start site region 148707
Tssr148708 17 53539466 to 53539467 1 - TSS region transcription start site region 148708
Tssr5169 17 53565899 to 53565902 3 + TSS region transcription start site region 5169
Tssr145221 17 53566736 to 53566763 27 + TSS region transcription start site region 145221
Cpgi9316 17 53566742 to 53568562 1820 CpG island CpG island 9316
Kat2b 17 53566861 to 53672720 105859 + protein coding gene K(lysine) acetyltransferase 2B
Tssr145222 17 53566976 to 53567023 47 + TSS region transcription start site region 145222
Tssr145223 17 53567259 to 53567286 27 + TSS region transcription start site region 145223
Tssr145224 17 53567288 to 53567310 22 + TSS region transcription start site region 145224
Tssr145225 17 53567314 to 53567321 7 + TSS region transcription start site region 145225
Tssr148709 17 53568318 to 53568332 14 - TSS region transcription start site region 148709
Tssr148710 17 53568336 to 53568356 20 - TSS region transcription start site region 148710
Tssr145226 17 53568438 to 53568460 22 + TSS region transcription start site region 145226
Tssr145227 17 53570237 to 53570240 3 + TSS region transcription start site region 145227
Cpgi9317 17 53578791 to 53578986 195 CpG island CpG island 9317
Tssr145228 17 53584104 to 53584118 14 + TSS region transcription start site region 145228
Tssr145229 17 53584124 to 53584141 17 + TSS region transcription start site region 145229
Gm6919 17 53598181 to 53598663 482 - pseudogene predicted gene 6919
Tssr145230 17 53628399 to 53628412 13 + TSS region transcription start site region 145230
Sgo1 17 53674786 to 53689326 14540 - protein coding gene shugoshin 1
Tssr148711 17 53682943 to 53682948 5 - TSS region transcription start site region 148711
Cpgi9318 17 53688855 to 53689915 1060 CpG island CpG island 9318
Tssr148712 17 53689231 to 53689253 22 - TSS region transcription start site region 148712
Tssr148713 17 53689266 to 53689309 43 - TSS region transcription start site region 148713
Gm31532 17 53699706 to 53700472 766 + pseudogene predicted gene, 31532
Rab5a-ps 17 53702320 to 53702972 652 - pseudogene RAB5A, member RAS oncogene family, pseudogene
4932415M13Rik 17 53716509 to 53733843 17334 + lincRNA gene RIKEN cDNA 4932415M13 gene
Gm49917 17 53734511 to 53734857 346 + pseudogene predicted gene, 49917