Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:52996122-53522768

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D17Mit86 17 53021695 to 53021844 149 DNA segment DNA segment, Chr 17, Massachusetts Institute of Technology 86
Tssr5167 17 53022780 to 53022781 1 - TSS region transcription start site region 5167
Tssr5168 17 53145589 to 53145592 3 + TSS region transcription start site region 5168
Gm9210 17 53196451 to 53198567 2116 + pseudogene predicted gene 9210
Gm49913 17 53245963 to 53246341 378 + pseudogene predicted gene, 49913
Gm19598 17 53251289 to 53251478 189 + pseudogene predicted gene, 19598
Gm41601 17 53256122 to 53262768 6646 - lncRNA gene predicted gene, 41601
Gm49914 17 53303988 to 53304407 419 - pseudogene predicted gene, 49914
Tssr145208 17 53354466 to 53354472 6 + TSS region transcription start site region 145208
Gm29770 17 53354512 to 53354821 309 + pseudogene predicted gene, 29770
Gm9214 17 53359927 to 53361889 1962 + pseudogene predicted gene 9214
Efhb 17 53398889 to 53463321 64432 - protein coding gene EF hand domain family, member B
Tssr145209 17 53421920 to 53421930 10 + TSS region transcription start site region 145209
Tssr145210 17 53421933 to 53421939 6 + TSS region transcription start site region 145210
Tssr148704 17 53463296 to 53463314 18 - TSS region transcription start site region 148704
Tssr148705 17 53463315 to 53463340 25 - TSS region transcription start site region 148705
Tpt1-ps7 17 53466649 to 53467315 666 - pseudogene tumor protein, translationally-controlled, pseudogene 7
Cpgi9315 17 53478664 to 53480105 1441 CpG island CpG island 9315
Tssr145211 17 53479212 to 53479237 25 + TSS region transcription start site region 145211
Rab5a 17 53479234 to 53507678 28444 + protein coding gene RAB5A, member RAS oncogene family
Tssr145212 17 53479242 to 53479303 61 + TSS region transcription start site region 145212
Tssr145213 17 53479337 to 53479387 50 + TSS region transcription start site region 145213
Tssr145214 17 53479429 to 53479448 19 + TSS region transcription start site region 145214
Tssr145215 17 53479459 to 53479470 11 + TSS region transcription start site region 145215
Tssr145216 17 53479473 to 53479494 21 + TSS region transcription start site region 145216
Tssr145217 17 53479502 to 53479511 9 + TSS region transcription start site region 145217
Tssr145218 17 53479527 to 53479538 11 + TSS region transcription start site region 145218
Smmq2 17 53482715 to 53482715 0 QTL soleus muscle mass QTL 2
Tssr145219 17 53491363 to 53491393 30 + TSS region transcription start site region 145219
Tssr145220 17 53492888 to 53492892 4 + TSS region transcription start site region 145220
Gm49915 17 53496081 to 53500946 4865 - antisense lncRNA gene predicted gene, 49915
Pp2d1 17 53507460 to 53539451 31991 - protein coding gene protein phosphatase 2C-like domain containing 1