Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:5236670-5436684

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arid1b 17 4994332 to 5347656 353324 + protein coding gene AT rich interactive domain 1B (SWI-like)
Tssr142400 17 5242990 to 5242999 9 + TSS region transcription start site region 142400
Tssr142401 17 5278453 to 5278464 11 + TSS region transcription start site region 142401
Tssr142402 17 5278502 to 5278507 5 + TSS region transcription start site region 142402
Tssr142403 17 5324960 to 5324965 5 + TSS region transcription start site region 142403
Tssr142404 17 5332544 to 5332582 38 + TSS region transcription start site region 142404
Tssr142405 17 5334822 to 5334831 9 + TSS region transcription start site region 142405
Tssr142406 17 5334837 to 5334850 13 + TSS region transcription start site region 142406
Tssr142407 17 5336670 to 5336684 14 + TSS region transcription start site region 142407
Cpgi8556 17 5341860 to 5342748 888 CpG island CpG island 8556
Tssr142408 17 5343972 to 5343978 6 + TSS region transcription start site region 142408
Cpgi8557 17 5397324 to 5397987 663 CpG island CpG island 8557
Tssr142409 17 5401007 to 5401018 11 + TSS region transcription start site region 142409
D17Jcs98 17 5403550 to 5403768 218 DNA segment DNA segment, Chr 17, John C. Schimenti 98
Tssr142410 17 5404075 to 5404082 7 + TSS region transcription start site region 142410
Tssr146299 17 5406632 to 5406664 32 - TSS region transcription start site region 146299
Tmem242 17 5410870 to 5440259 29389 - protein coding gene transmembrane protein 242
Gm29050 17 5412064 to 5413483 1419 + antisense lncRNA gene predicted gene 29050
Ldhal6b 17 5417323 to 5418767 1444 - protein coding gene lactate dehydrogenase A-like 6B
Cpgi8558 17 5418294 to 5418803 509 CpG island CpG island 8558
Tssr146300 17 5418664 to 5418742 78 - TSS region transcription start site region 146300
Gm22475 17 5421464 to 5421565 101 + miRNA gene predicted gene, 22475